Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.81■□□□□ 0.6
CLK3P49761 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLK3P49761 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.81■□□□□ 0.6
CLK3P49761 AC100791.3-201ENST00000617619 330 ntBASIC18.81■□□□□ 0.6
CLK3P49761 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CLK3P49761 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLK3P49761 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLK3P49761 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLK3P49761 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLK3P49761 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CLK3P49761 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLK3P49761 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.81■□□□□ 0.6
CLK3P49761 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.81■□□□□ 0.6
CLK3P49761 AL158211.5-201ENST00000623583 2518 ntBASIC18.8■□□□□ 0.6
CLK3P49761 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLK3P49761 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.8■□□□□ 0.6
CLK3P49761 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CLK3P49761 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.8■□□□□ 0.6
CLK3P49761 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.8■□□□□ 0.6
CLK3P49761 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLK3P49761 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLK3P49761 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CLK3P49761 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLK3P49761 MIR663A-201ENST00000385250 93 ntBASIC18.8■□□□□ 0.6
CLK3P49761 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLK3P49761 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.8■□□□□ 0.6
CLK3P49761 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.8■□□□□ 0.6
CLK3P49761 AC016405.3-201ENST00000607710 860 ntBASIC18.8■□□□□ 0.6
CLK3P49761 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLK3P49761 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.8■□□□□ 0.6
CLK3P49761 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLK3P49761 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLK3P49761 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLK3P49761 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLK3P49761 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLK3P49761 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.79■□□□□ 0.6
CLK3P49761 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLK3P49761 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLK3P49761 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLK3P49761 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLK3P49761 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLK3P49761 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLK3P49761 AL512625.2-201ENST00000417533 625 ntBASIC18.79■□□□□ 0.6
CLK3P49761 AC133552.2-202ENST00000575694 574 ntBASIC18.79■□□□□ 0.6
CLK3P49761 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.79■□□□□ 0.6
CLK3P49761 AC026471.1-201ENST00000564629 3026 ntBASIC18.79■□□□□ 0.6
CLK3P49761 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.79■□□□□ 0.6
CLK3P49761 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLK3P49761 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLK3P49761 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CLK3P49761 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLK3P49761 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLK3P49761 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CLK3P49761 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CLK3P49761 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.79■□□□□ 0.6
CLK3P49761 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLK3P49761 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLK3P49761 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLK3P49761 AC092720.2-201ENST00000602388 1665 ntBASIC18.79■□□□□ 0.6
CLK3P49761 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLK3P49761 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLK3P49761 AC138932.1-201ENST00000534164 6830 ntBASIC18.79■□□□□ 0.6
CLK3P49761 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLK3P49761 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CLK3P49761 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLK3P49761 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLK3P49761 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.78■□□□□ 0.6
CLK3P49761 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CLK3P49761 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLK3P49761 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLK3P49761 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLK3P49761 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.78■□□□□ 0.6
CLK3P49761 AF201337.1-201ENST00000520239 748 ntBASIC18.78■□□□□ 0.6
CLK3P49761 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.78■□□□□ 0.6
CLK3P49761 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CLK3P49761 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLK3P49761 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLK3P49761 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.78■□□□□ 0.6
CLK3P49761 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CLK3P49761 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLK3P49761 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLK3P49761 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLK3P49761 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CLK3P49761 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.77■□□□□ 0.6
CLK3P49761 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLK3P49761 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CLK3P49761 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.77■□□□□ 0.6
CLK3P49761 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLK3P49761 MCRIP2P1-201ENST00000394346 511 ntBASIC18.77■□□□□ 0.6
CLK3P49761 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLK3P49761 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CLK3P49761 RAP2CP1-201ENST00000605103 478 ntBASIC18.77■□□□□ 0.6
CLK3P49761 AL121832.2-201ENST00000610979 668 ntBASIC18.77■□□□□ 0.6
CLK3P49761 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.77■□□□□ 0.6
CLK3P49761 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.77■□□□□ 0.6
CLK3P49761 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CLK3P49761 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLK3P49761 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CLK3P49761 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
CLK3P49761 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms