Protein–RNA interactions for Protein: P47992

XCL1, Lymphotactin, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1P47992 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC13.65□□□□□ -0.22
XCL1P47992 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
XCL1P47992 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
XCL1P47992 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC13.65□□□□□ -0.22
XCL1P47992 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
XCL1P47992 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
XCL1P47992 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
XCL1P47992 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
XCL1P47992 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
XCL1P47992 GUK1-205ENST00000366722 850 ntTSL 3 BASIC13.65□□□□□ -0.22
XCL1P47992 PGM5P4-201ENST00000421970 445 ntBASIC13.65□□□□□ -0.22
XCL1P47992 AC097381.1-201ENST00000429019 1296 ntBASIC13.65□□□□□ -0.22
XCL1P47992 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
XCL1P47992 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC13.65□□□□□ -0.22
XCL1P47992 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.65□□□□□ -0.22
XCL1P47992 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
XCL1P47992 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC13.65□□□□□ -0.22
XCL1P47992 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
XCL1P47992 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
XCL1P47992 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
XCL1P47992 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
XCL1P47992 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
XCL1P47992 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
XCL1P47992 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
XCL1P47992 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
XCL1P47992 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
XCL1P47992 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
XCL1P47992 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC13.65□□□□□ -0.22
XCL1P47992 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
XCL1P47992 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
XCL1P47992 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC13.64□□□□□ -0.23
XCL1P47992 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC13.64□□□□□ -0.23
XCL1P47992 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC13.64□□□□□ -0.23
XCL1P47992 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
XCL1P47992 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC13.64□□□□□ -0.23
XCL1P47992 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC13.64□□□□□ -0.23
XCL1P47992 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
XCL1P47992 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
XCL1P47992 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.64□□□□□ -0.23
XCL1P47992 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC13.64□□□□□ -0.23
XCL1P47992 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
XCL1P47992 MYCNOS-205ENST00000641950 531 ntBASIC13.64□□□□□ -0.23
XCL1P47992 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.64□□□□□ -0.23
XCL1P47992 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
XCL1P47992 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.64□□□□□ -0.23
XCL1P47992 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
XCL1P47992 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.63□□□□□ -0.23
XCL1P47992 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
XCL1P47992 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
XCL1P47992 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
XCL1P47992 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
XCL1P47992 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
XCL1P47992 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
XCL1P47992 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
XCL1P47992 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
XCL1P47992 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
XCL1P47992 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
XCL1P47992 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
XCL1P47992 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
XCL1P47992 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.63□□□□□ -0.23
XCL1P47992 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.63□□□□□ -0.23
XCL1P47992 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC13.63□□□□□ -0.23
XCL1P47992 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
XCL1P47992 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC13.63□□□□□ -0.23
XCL1P47992 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
XCL1P47992 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
XCL1P47992 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.63□□□□□ -0.23
XCL1P47992 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
XCL1P47992 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
XCL1P47992 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC13.63□□□□□ -0.23
XCL1P47992 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
XCL1P47992 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
XCL1P47992 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.63□□□□□ -0.23
XCL1P47992 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
XCL1P47992 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
XCL1P47992 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
XCL1P47992 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.63□□□□□ -0.23
XCL1P47992 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms