Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 FAM8A6P-201ENST00000407496 1135 ntBASIC24.62■■□□□ 1.53
PDE6BP35913 ISCU-203ENST00000431221 799 ntTSL 2 BASIC24.62■■□□□ 1.53
PDE6BP35913 KRT18P16-201ENST00000510337 1294 ntBASIC24.62■■□□□ 1.53
PDE6BP35913 SLC25A1P4-201ENST00000567977 778 ntBASIC24.62■■□□□ 1.53
PDE6BP35913 AC130371.2-201ENST00000619443 611 ntBASIC24.62■■□□□ 1.53
PDE6BP35913 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
PDE6BP35913 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PDE6BP35913 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
PDE6BP35913 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDE6BP35913 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PDE6BP35913 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDE6BP35913 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.62■■□□□ 1.53
PDE6BP35913 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDE6BP35913 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDE6BP35913 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDE6BP35913 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
PDE6BP35913 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDE6BP35913 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDE6BP35913 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC24.61■■□□□ 1.53
PDE6BP35913 TUBB8P6-201ENST00000436895 1288 ntBASIC24.61■■□□□ 1.53
PDE6BP35913 AC091390.4-202ENST00000476426 537 ntBASIC24.61■■□□□ 1.53
PDE6BP35913 FDX2-206ENST00000492239 773 ntTSL 2 BASIC24.61■■□□□ 1.53
PDE6BP35913 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PDE6BP35913 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC24.61■■□□□ 1.53
PDE6BP35913 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC24.61■■□□□ 1.53
PDE6BP35913 AP000692.2-201ENST00000608391 879 ntBASIC24.61■■□□□ 1.53
PDE6BP35913 MYC-208ENST00000641036 567 ntBASIC24.61■■□□□ 1.53
PDE6BP35913 AC116351.2-201ENST00000606540 1585 ntBASIC24.61■■□□□ 1.53
PDE6BP35913 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PDE6BP35913 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PDE6BP35913 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDE6BP35913 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDE6BP35913 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDE6BP35913 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDE6BP35913 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.61■■□□□ 1.53
PDE6BP35913 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDE6BP35913 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PDE6BP35913 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.6■■□□□ 1.53
PDE6BP35913 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
PDE6BP35913 AL049796.1-201ENST00000565336 1766 ntBASIC24.6■■□□□ 1.53
PDE6BP35913 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDE6BP35913 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDE6BP35913 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDE6BP35913 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDE6BP35913 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDE6BP35913 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC24.6■■□□□ 1.53
PDE6BP35913 NMU-205ENST00000511469 756 ntTSL 3 BASIC24.6■■□□□ 1.53
PDE6BP35913 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC24.6■■□□□ 1.53
PDE6BP35913 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC24.6■■□□□ 1.53
PDE6BP35913 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC24.6■■□□□ 1.53
PDE6BP35913 CYGB-204ENST00000589342 815 ntTSL 3 BASIC24.6■■□□□ 1.53
PDE6BP35913 WDR88-203ENST00000592765 651 ntTSL 5 BASIC24.6■■□□□ 1.53
PDE6BP35913 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC24.6■■□□□ 1.53
PDE6BP35913 Z98882.1-201ENST00000622160 2253 ntBASIC24.6■■□□□ 1.53
PDE6BP35913 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PDE6BP35913 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
PDE6BP35913 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PDE6BP35913 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
PDE6BP35913 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
PDE6BP35913 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC24.59■■□□□ 1.53
PDE6BP35913 TFP1-202ENST00000475455 1573 ntBASIC24.59■■□□□ 1.53
PDE6BP35913 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.59■■□□□ 1.53
PDE6BP35913 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PDE6BP35913 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDE6BP35913 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDE6BP35913 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDE6BP35913 RNF152P1-201ENST00000397754 604 ntBASIC24.59■■□□□ 1.53
PDE6BP35913 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC24.59■■□□□ 1.53
PDE6BP35913 SAPCD2P2-201ENST00000431719 1174 ntBASIC24.59■■□□□ 1.53
PDE6BP35913 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC24.59■■□□□ 1.53
PDE6BP35913 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDE6BP35913 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PDE6BP35913 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDE6BP35913 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.59■■□□□ 1.53
PDE6BP35913 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PDE6BP35913 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PDE6BP35913 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC24.58■■□□□ 1.53
PDE6BP35913 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24.58■■□□□ 1.53
PDE6BP35913 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PDE6BP35913 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC24.58■■□□□ 1.53
PDE6BP35913 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC24.58■■□□□ 1.53
PDE6BP35913 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC24.58■■□□□ 1.53
PDE6BP35913 METTL23-204ENST00000586752 904 ntTSL 2 BASIC24.58■■□□□ 1.53
PDE6BP35913 AC139887.4-201ENST00000607877 719 ntBASIC24.58■■□□□ 1.53
PDE6BP35913 AL138966.2-201ENST00000621997 464 ntBASIC24.58■■□□□ 1.53
PDE6BP35913 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC24.58■■□□□ 1.53
PDE6BP35913 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC24.58■■□□□ 1.53
PDE6BP35913 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC24.58■■□□□ 1.52
PDE6BP35913 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC24.58■■□□□ 1.52
PDE6BP35913 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PDE6BP35913 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
PDE6BP35913 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PDE6BP35913 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
PDE6BP35913 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.57■■□□□ 1.52
PDE6BP35913 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
PDE6BP35913 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC24.57■■□□□ 1.52
PDE6BP35913 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.57■■□□□ 1.52
PDE6BP35913 HIST1H2APS4-201ENST00000362070 348 ntBASIC24.57■■□□□ 1.52
PDE6BP35913 AL031133.1-201ENST00000406807 723 ntBASIC24.57■■□□□ 1.52
PDE6BP35913 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms