Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT20P35900 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
KRT20P35900 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT20P35900 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT20P35900 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT20P35900 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
KRT20P35900 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT20P35900 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT20P35900 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT20P35900 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT20P35900 MKRN4P-201ENST00000444706 1521 ntBASIC18.85■□□□□ 0.61
KRT20P35900 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
KRT20P35900 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT20P35900 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT20P35900 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT20P35900 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT20P35900 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.85■□□□□ 0.61
KRT20P35900 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.85■□□□□ 0.61
KRT20P35900 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.85■□□□□ 0.61
KRT20P35900 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT20P35900 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT20P35900 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT20P35900 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT20P35900 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT20P35900 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
KRT20P35900 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT20P35900 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
KRT20P35900 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
KRT20P35900 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT20P35900 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT20P35900 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT20P35900 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
KRT20P35900 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
KRT20P35900 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT20P35900 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.84■□□□□ 0.61
KRT20P35900 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT20P35900 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
KRT20P35900 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT20P35900 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.84■□□□□ 0.61
KRT20P35900 GPX1P1-201ENST00000388829 606 ntBASIC18.84■□□□□ 0.61
KRT20P35900 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.84■□□□□ 0.61
KRT20P35900 AC083906.2-201ENST00000511578 360 ntBASIC18.84■□□□□ 0.61
KRT20P35900 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
KRT20P35900 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
KRT20P35900 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT20P35900 AL050303.2-201ENST00000619798 666 ntBASIC18.84■□□□□ 0.61
KRT20P35900 MIR2861-201ENST00000636310 90 ntBASIC18.84■□□□□ 0.61
KRT20P35900 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.84■□□□□ 0.61
KRT20P35900 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
KRT20P35900 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
KRT20P35900 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
KRT20P35900 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
KRT20P35900 AC087633.2-202ENST00000565166 1439 ntBASIC18.83■□□□□ 0.61
KRT20P35900 AC010980.2-201ENST00000587099 1412 ntBASIC18.83■□□□□ 0.61
KRT20P35900 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KRT20P35900 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
KRT20P35900 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KRT20P35900 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
KRT20P35900 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.83■□□□□ 0.6
KRT20P35900 AC093787.1-201ENST00000450396 207 ntBASIC18.83■□□□□ 0.6
KRT20P35900 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.83■□□□□ 0.6
KRT20P35900 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.83■□□□□ 0.6
KRT20P35900 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.83■□□□□ 0.6
KRT20P35900 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.83■□□□□ 0.6
KRT20P35900 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT20P35900 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.83■□□□□ 0.6
KRT20P35900 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
KRT20P35900 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.83■□□□□ 0.6
KRT20P35900 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT20P35900 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT20P35900 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.83■□□□□ 0.6
KRT20P35900 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
KRT20P35900 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
KRT20P35900 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KRT20P35900 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT20P35900 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT20P35900 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT20P35900 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
KRT20P35900 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT20P35900 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT20P35900 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.82■□□□□ 0.6
KRT20P35900 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT20P35900 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
KRT20P35900 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT20P35900 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT20P35900 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT20P35900 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT20P35900 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.82■□□□□ 0.6
KRT20P35900 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KRT20P35900 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.82■□□□□ 0.6
KRT20P35900 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT20P35900 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.82■□□□□ 0.6
KRT20P35900 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
KRT20P35900 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.82■□□□□ 0.6
KRT20P35900 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.82■□□□□ 0.6
KRT20P35900 AL356652.1-201ENST00000615962 565 ntBASIC18.82■□□□□ 0.6
KRT20P35900 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.82■□□□□ 0.6
KRT20P35900 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.82■□□□□ 0.6
KRT20P35900 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT20P35900 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms