Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.96■□□□□ 0.95
RFC1P35251 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RFC1P35251 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.96■□□□□ 0.95
RFC1P35251 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFC1P35251 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
RFC1P35251 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RFC1P35251 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.96■□□□□ 0.95
RFC1P35251 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFC1P35251 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.95■□□□□ 0.94
RFC1P35251 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RFC1P35251 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFC1P35251 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFC1P35251 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RFC1P35251 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.95■□□□□ 0.94
RFC1P35251 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RFC1P35251 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFC1P35251 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RFC1P35251 AC098934.4-201ENST00000564127 592 ntBASIC20.95■□□□□ 0.94
RFC1P35251 MIR4758-201ENST00000577688 71 ntBASIC20.95■□□□□ 0.94
RFC1P35251 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
RFC1P35251 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.95■□□□□ 0.94
RFC1P35251 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.95■□□□□ 0.94
RFC1P35251 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
RFC1P35251 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFC1P35251 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFC1P35251 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RFC1P35251 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFC1P35251 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFC1P35251 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFC1P35251 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.94■□□□□ 0.94
RFC1P35251 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RFC1P35251 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFC1P35251 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFC1P35251 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFC1P35251 HLA-G-202ENST00000376815 851 ntBASIC20.94■□□□□ 0.94
RFC1P35251 HLA-G-203ENST00000376818 1127 ntBASIC20.94■□□□□ 0.94
RFC1P35251 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.94■□□□□ 0.94
RFC1P35251 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.94■□□□□ 0.94
RFC1P35251 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.94■□□□□ 0.94
RFC1P35251 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RFC1P35251 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.94■□□□□ 0.94
RFC1P35251 AC104771.1-201ENST00000603335 964 ntBASIC20.94■□□□□ 0.94
RFC1P35251 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.94■□□□□ 0.94
RFC1P35251 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFC1P35251 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFC1P35251 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFC1P35251 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RFC1P35251 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.94■□□□□ 0.94
RFC1P35251 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFC1P35251 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFC1P35251 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.94■□□□□ 0.94
RFC1P35251 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RFC1P35251 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFC1P35251 AC125437.2-201ENST00000625180 2167 ntBASIC20.93■□□□□ 0.94
RFC1P35251 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RFC1P35251 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFC1P35251 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.93■□□□□ 0.94
RFC1P35251 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.93■□□□□ 0.94
RFC1P35251 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RFC1P35251 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFC1P35251 KRT16P6-202ENST00000425692 1426 ntBASIC20.93■□□□□ 0.94
RFC1P35251 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.93■□□□□ 0.94
RFC1P35251 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RFC1P35251 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
RFC1P35251 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.92■□□□□ 0.94
RFC1P35251 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFC1P35251 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFC1P35251 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.92■□□□□ 0.94
RFC1P35251 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFC1P35251 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.92■□□□□ 0.94
RFC1P35251 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.92■□□□□ 0.94
RFC1P35251 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFC1P35251 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFC1P35251 MYC-209ENST00000641252 345 ntBASIC20.92■□□□□ 0.94
RFC1P35251 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFC1P35251 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFC1P35251 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RFC1P35251 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFC1P35251 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFC1P35251 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFC1P35251 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.92■□□□□ 0.94
RFC1P35251 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFC1P35251 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RFC1P35251 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.92■□□□□ 0.94
RFC1P35251 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFC1P35251 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFC1P35251 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.92■□□□□ 0.94
RFC1P35251 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFC1P35251 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFC1P35251 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RFC1P35251 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFC1P35251 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFC1P35251 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFC1P35251 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
RFC1P35251 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFC1P35251 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.91■□□□□ 0.94
RFC1P35251 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RFC1P35251 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.91■□□□□ 0.94
RFC1P35251 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.91■□□□□ 0.94
RFC1P35251 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms