Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VARSP26640 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VARSP26640 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VARSP26640 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.51■□□□□ 0.71
VARSP26640 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VARSP26640 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
VARSP26640 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
VARSP26640 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VARSP26640 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
VARSP26640 POU5F1P3-201ENST00000428824 1078 ntBASIC19.51■□□□□ 0.71
VARSP26640 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
VARSP26640 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
VARSP26640 ITM2C-210ENST00000620962 501 ntBASIC19.51■□□□□ 0.71
VARSP26640 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VARSP26640 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.51■□□□□ 0.71
VARSP26640 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.51■□□□□ 0.71
VARSP26640 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
VARSP26640 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VARSP26640 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
VARSP26640 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
VARSP26640 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VARSP26640 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.5■□□□□ 0.71
VARSP26640 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VARSP26640 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
VARSP26640 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.5■□□□□ 0.71
VARSP26640 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VARSP26640 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.5■□□□□ 0.71
VARSP26640 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VARSP26640 KRT18P29-201ENST00000397031 1267 ntBASIC19.5■□□□□ 0.71
VARSP26640 AL512625.2-201ENST00000417533 625 ntBASIC19.5■□□□□ 0.71
VARSP26640 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.5■□□□□ 0.71
VARSP26640 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.5■□□□□ 0.71
VARSP26640 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.5■□□□□ 0.71
VARSP26640 AC105020.6-201ENST00000621523 1217 ntBASIC19.5■□□□□ 0.71
VARSP26640 KRT17P1-201ENST00000399211 1546 ntBASIC19.5■□□□□ 0.71
VARSP26640 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.5■□□□□ 0.71
VARSP26640 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
VARSP26640 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
VARSP26640 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
VARSP26640 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARSP26640 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VARSP26640 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARSP26640 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARSP26640 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARSP26640 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
VARSP26640 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARSP26640 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VARSP26640 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARSP26640 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VARSP26640 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARSP26640 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.49■□□□□ 0.71
VARSP26640 AC093827.2-201ENST00000512654 315 ntBASIC19.49■□□□□ 0.71
VARSP26640 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.49■□□□□ 0.71
VARSP26640 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
VARSP26640 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.49■□□□□ 0.71
VARSP26640 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.49■□□□□ 0.71
VARSP26640 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.49■□□□□ 0.71
VARSP26640 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.49■□□□□ 0.71
VARSP26640 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARSP26640 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARSP26640 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.49■□□□□ 0.71
VARSP26640 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARSP26640 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARSP26640 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.49■□□□□ 0.71
VARSP26640 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARSP26640 TCF3P1-201ENST00000423021 1937 ntBASIC19.49■□□□□ 0.71
VARSP26640 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARSP26640 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
VARSP26640 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.48■□□□□ 0.71
VARSP26640 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VARSP26640 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VARSP26640 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARSP26640 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARSP26640 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
VARSP26640 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
VARSP26640 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARSP26640 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.48■□□□□ 0.71
VARSP26640 AP006294.2-201ENST00000641667 209 ntBASIC19.48■□□□□ 0.71
VARSP26640 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARSP26640 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARSP26640 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARSP26640 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VARSP26640 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
VARSP26640 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VARSP26640 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
VARSP26640 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VARSP26640 MKRN4P-201ENST00000444706 1521 ntBASIC19.47■□□□□ 0.71
VARSP26640 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
VARSP26640 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.47■□□□□ 0.71
VARSP26640 MIR4651-201ENST00000582622 73 ntBASIC19.47■□□□□ 0.71
VARSP26640 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VARSP26640 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VARSP26640 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.47■□□□□ 0.71
VARSP26640 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.47■□□□□ 0.71
VARSP26640 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VARSP26640 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VARSP26640 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VARSP26640 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.46■□□□□ 0.71
VARSP26640 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VARSP26640 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms