Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.07■□□□□ 0.64
PTX3P26022 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTX3P26022 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PTX3P26022 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.07■□□□□ 0.64
PTX3P26022 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTX3P26022 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTX3P26022 GUSBP6-202ENST00000438529 1198 ntBASIC19.07■□□□□ 0.64
PTX3P26022 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PTX3P26022 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.07■□□□□ 0.64
PTX3P26022 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.07■□□□□ 0.64
PTX3P26022 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.07■□□□□ 0.64
PTX3P26022 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.07■□□□□ 0.64
PTX3P26022 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTX3P26022 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.07■□□□□ 0.64
PTX3P26022 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.07■□□□□ 0.64
PTX3P26022 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.07■□□□□ 0.64
PTX3P26022 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTX3P26022 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PTX3P26022 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.07■□□□□ 0.64
PTX3P26022 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTX3P26022 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.07■□□□□ 0.64
PTX3P26022 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTX3P26022 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.07■□□□□ 0.64
PTX3P26022 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTX3P26022 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTX3P26022 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTX3P26022 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTX3P26022 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PTX3P26022 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTX3P26022 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTX3P26022 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTX3P26022 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.06■□□□□ 0.64
PTX3P26022 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.06■□□□□ 0.64
PTX3P26022 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTX3P26022 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.06■□□□□ 0.64
PTX3P26022 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTX3P26022 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.06■□□□□ 0.64
PTX3P26022 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTX3P26022 DUSP5P2-201ENST00000426873 1033 ntBASIC19.06■□□□□ 0.64
PTX3P26022 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
PTX3P26022 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.06■□□□□ 0.64
PTX3P26022 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.06■□□□□ 0.64
PTX3P26022 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTX3P26022 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTX3P26022 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTX3P26022 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTX3P26022 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTX3P26022 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTX3P26022 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTX3P26022 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.06■□□□□ 0.64
PTX3P26022 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PTX3P26022 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PTX3P26022 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTX3P26022 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTX3P26022 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTX3P26022 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTX3P26022 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTX3P26022 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PTX3P26022 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
PTX3P26022 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTX3P26022 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.05■□□□□ 0.64
PTX3P26022 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
PTX3P26022 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.05■□□□□ 0.64
PTX3P26022 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.05■□□□□ 0.64
PTX3P26022 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.05■□□□□ 0.64
PTX3P26022 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.05■□□□□ 0.64
PTX3P26022 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.05■□□□□ 0.64
PTX3P26022 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
PTX3P26022 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.05■□□□□ 0.64
PTX3P26022 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTX3P26022 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTX3P26022 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.05■□□□□ 0.64
PTX3P26022 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTX3P26022 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.05■□□□□ 0.64
PTX3P26022 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTX3P26022 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTX3P26022 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTX3P26022 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTX3P26022 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
PTX3P26022 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTX3P26022 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.04■□□□□ 0.64
PTX3P26022 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PTX3P26022 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.04■□□□□ 0.64
PTX3P26022 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
PTX3P26022 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTX3P26022 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.04■□□□□ 0.64
PTX3P26022 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.04■□□□□ 0.64
PTX3P26022 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PTX3P26022 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.04■□□□□ 0.64
PTX3P26022 AC091874.3-201ENST00000512672 1195 ntBASIC19.04■□□□□ 0.64
PTX3P26022 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTX3P26022 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.04■□□□□ 0.64
PTX3P26022 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PTX3P26022 AFG3L1P-217ENST00000557444 2447 ntBASIC19.04■□□□□ 0.64
PTX3P26022 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.04■□□□□ 0.64
PTX3P26022 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTX3P26022 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
PTX3P26022 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTX3P26022 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTX3P26022 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms