Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3BP20337 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RAB3BP20337 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3BP20337 AL136116.3-201ENST00000402907 1138 ntBASIC17.4■□□□□ 0.38
RAB3BP20337 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.4■□□□□ 0.38
RAB3BP20337 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB3BP20337 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3BP20337 AC027682.1-201ENST00000562846 899 ntBASIC17.4■□□□□ 0.38
RAB3BP20337 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RAB3BP20337 FAM21FP-204ENST00000608637 956 ntBASIC17.4■□□□□ 0.38
RAB3BP20337 LINC01465-201ENST00000408887 1940 ntBASIC17.4■□□□□ 0.38
RAB3BP20337 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3BP20337 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RAB3BP20337 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB3BP20337 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3BP20337 HCG11-201ENST00000411553 5696 ntBASIC17.4■□□□□ 0.38
RAB3BP20337 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3BP20337 AC135279.3-201ENST00000610945 1311 ntBASIC17.4■□□□□ 0.38
RAB3BP20337 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3BP20337 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB3BP20337 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3BP20337 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RAB3BP20337 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RAB3BP20337 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
RAB3BP20337 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RAB3BP20337 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RAB3BP20337 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3BP20337 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.39■□□□□ 0.37
RAB3BP20337 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RAB3BP20337 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB3BP20337 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB3BP20337 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.39■□□□□ 0.37
RAB3BP20337 AC079140.4-201ENST00000507448 529 ntBASIC17.39■□□□□ 0.37
RAB3BP20337 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3BP20337 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB3BP20337 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3BP20337 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3BP20337 AC009237.14-201ENST00000609975 1594 ntBASIC17.39■□□□□ 0.37
RAB3BP20337 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.39■□□□□ 0.37
RAB3BP20337 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3BP20337 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3BP20337 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.39■□□□□ 0.37
RAB3BP20337 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB3BP20337 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.39■□□□□ 0.37
RAB3BP20337 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB3BP20337 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RAB3BP20337 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3BP20337 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3BP20337 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3BP20337 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3BP20337 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3BP20337 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3BP20337 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3BP20337 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RAB3BP20337 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3BP20337 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3BP20337 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3BP20337 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB3BP20337 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3BP20337 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB3BP20337 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.38■□□□□ 0.37
RAB3BP20337 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3BP20337 AC012414.1-201ENST00000556676 535 ntBASIC17.38■□□□□ 0.37
RAB3BP20337 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB3BP20337 TPRG1LP1-201ENST00000598702 760 ntBASIC17.38■□□□□ 0.37
RAB3BP20337 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RAB3BP20337 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3BP20337 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RAB3BP20337 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB3BP20337 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3BP20337 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB3BP20337 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB3BP20337 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB3BP20337 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RAB3BP20337 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
RAB3BP20337 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
RAB3BP20337 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB3BP20337 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB3BP20337 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RAB3BP20337 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 AC007322.3-201ENST00000426526 701 ntBASIC17.37■□□□□ 0.37
RAB3BP20337 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.37■□□□□ 0.37
RAB3BP20337 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.37■□□□□ 0.37
RAB3BP20337 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB3BP20337 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms