Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
UBL4AP11441 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBL4AP11441 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBL4AP11441 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
UBL4AP11441 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.37■□□□□ 0.53
UBL4AP11441 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.37■□□□□ 0.53
UBL4AP11441 AL031963.3-201ENST00000606441 850 ntBASIC18.37■□□□□ 0.53
UBL4AP11441 AC092118.2-201ENST00000613495 667 ntBASIC18.37■□□□□ 0.53
UBL4AP11441 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.37■□□□□ 0.53
UBL4AP11441 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBL4AP11441 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBL4AP11441 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBL4AP11441 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBL4AP11441 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.37■□□□□ 0.53
UBL4AP11441 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
UBL4AP11441 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBL4AP11441 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBL4AP11441 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBL4AP11441 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBL4AP11441 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBL4AP11441 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBL4AP11441 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBL4AP11441 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBL4AP11441 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBL4AP11441 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
UBL4AP11441 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBL4AP11441 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
UBL4AP11441 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBL4AP11441 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
UBL4AP11441 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBL4AP11441 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBL4AP11441 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBL4AP11441 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
UBL4AP11441 KRT8P20-201ENST00000423953 1409 ntBASIC18.36■□□□□ 0.53
UBL4AP11441 KRT8P17-201ENST00000453110 1448 ntBASIC18.36■□□□□ 0.53
UBL4AP11441 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBL4AP11441 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.36■□□□□ 0.53
UBL4AP11441 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
UBL4AP11441 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.36■□□□□ 0.53
UBL4AP11441 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.36■□□□□ 0.53
UBL4AP11441 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
UBL4AP11441 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.36■□□□□ 0.53
UBL4AP11441 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBL4AP11441 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBL4AP11441 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBL4AP11441 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBL4AP11441 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBL4AP11441 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.35■□□□□ 0.53
UBL4AP11441 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBL4AP11441 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBL4AP11441 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBL4AP11441 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBL4AP11441 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBL4AP11441 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBL4AP11441 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBL4AP11441 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.35■□□□□ 0.53
UBL4AP11441 HLA-G-202ENST00000376815 851 ntBASIC18.35■□□□□ 0.53
UBL4AP11441 HLA-G-203ENST00000376818 1127 ntBASIC18.35■□□□□ 0.53
UBL4AP11441 DUSP5P2-201ENST00000426873 1033 ntBASIC18.35■□□□□ 0.53
UBL4AP11441 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
UBL4AP11441 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.35■□□□□ 0.53
UBL4AP11441 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.35■□□□□ 0.53
UBL4AP11441 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBL4AP11441 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBL4AP11441 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.35■□□□□ 0.53
UBL4AP11441 MIR4758-201ENST00000577688 71 ntBASIC18.35■□□□□ 0.53
UBL4AP11441 AL109923.1-201ENST00000618799 583 ntBASIC18.35■□□□□ 0.53
UBL4AP11441 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.35■□□□□ 0.53
UBL4AP11441 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
UBL4AP11441 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
UBL4AP11441 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBL4AP11441 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
UBL4AP11441 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.35■□□□□ 0.53
UBL4AP11441 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBL4AP11441 TCF3P1-201ENST00000423021 1937 ntBASIC18.35■□□□□ 0.53
UBL4AP11441 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBL4AP11441 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBL4AP11441 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
UBL4AP11441 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBL4AP11441 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
UBL4AP11441 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
UBL4AP11441 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.34■□□□□ 0.53
UBL4AP11441 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
UBL4AP11441 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBL4AP11441 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBL4AP11441 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBL4AP11441 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBL4AP11441 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBL4AP11441 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBL4AP11441 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
UBL4AP11441 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.34■□□□□ 0.53
UBL4AP11441 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.34■□□□□ 0.53
UBL4AP11441 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.34■□□□□ 0.53
UBL4AP11441 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
UBL4AP11441 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBL4AP11441 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.34■□□□□ 0.53
UBL4AP11441 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBL4AP11441 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBL4AP11441 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.34■□□□□ 0.53
UBL4AP11441 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms