Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 MTDHP1-201ENST00000605323 784 ntBASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCNYL3P0C7X3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 AL023875.1-201ENST00000640777 796 ntBASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCNYL3P0C7X3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCNYL3P0C7X3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCNYL3P0C7X3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCNYL3P0C7X3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 AC239809.2-201ENST00000415381 517 ntBASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 Z99916.2-201ENST00000604037 246 ntBASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCNYL3P0C7X3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL3P0C7X3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
CCNYL3P0C7X3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL3P0C7X3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL3P0C7X3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
CCNYL3P0C7X3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL3P0C7X3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL3P0C7X3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CCNYL3P0C7X3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL3P0C7X3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL3P0C7X3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL3P0C7X3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CCNYL3P0C7X3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCNYL3P0C7X3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CCNYL3P0C7X3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms