Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RB1P06400 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.12■□□□□ 0.97
RB1P06400 ECEL1P1-201ENST00000373592 1742 ntBASIC21.12■□□□□ 0.97
RB1P06400 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RB1P06400 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RB1P06400 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RB1P06400 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RB1P06400 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.12■□□□□ 0.97
RB1P06400 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.12■□□□□ 0.97
RB1P06400 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RB1P06400 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RB1P06400 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RB1P06400 HMGA1P5-201ENST00000412453 271 ntBASIC21.12■□□□□ 0.97
RB1P06400 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RB1P06400 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RB1P06400 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RB1P06400 YBX1P10-201ENST00000444752 975 ntBASIC21.12■□□□□ 0.97
RB1P06400 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.12■□□□□ 0.97
RB1P06400 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
RB1P06400 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RB1P06400 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RB1P06400 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RB1P06400 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RB1P06400 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
RB1P06400 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RB1P06400 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.12■□□□□ 0.97
RB1P06400 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.12■□□□□ 0.97
RB1P06400 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RB1P06400 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
RB1P06400 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.11■□□□□ 0.97
RB1P06400 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RB1P06400 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RB1P06400 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.11■□□□□ 0.97
RB1P06400 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RB1P06400 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RB1P06400 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RB1P06400 UPK3BP1-201ENST00000428678 509 ntBASIC21.11■□□□□ 0.97
RB1P06400 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.11■□□□□ 0.97
RB1P06400 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RB1P06400 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.11■□□□□ 0.97
RB1P06400 AP000692.2-201ENST00000608391 879 ntBASIC21.11■□□□□ 0.97
RB1P06400 AC130371.2-201ENST00000619443 611 ntBASIC21.11■□□□□ 0.97
RB1P06400 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RB1P06400 AL117328.2-201ENST00000624617 1940 ntBASIC21.1■□□□□ 0.97
RB1P06400 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RB1P06400 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.1■□□□□ 0.97
RB1P06400 FAM8A6P-201ENST00000407496 1135 ntBASIC21.1■□□□□ 0.97
RB1P06400 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.1■□□□□ 0.97
RB1P06400 TUBB8P6-201ENST00000436895 1288 ntBASIC21.1■□□□□ 0.97
RB1P06400 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RB1P06400 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RB1P06400 KRT18P16-201ENST00000510337 1294 ntBASIC21.1■□□□□ 0.97
RB1P06400 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RB1P06400 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RB1P06400 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.1■□□□□ 0.97
RB1P06400 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RB1P06400 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RB1P06400 AC116351.2-201ENST00000606540 1585 ntBASIC21.1■□□□□ 0.97
RB1P06400 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RB1P06400 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RB1P06400 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
RB1P06400 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RB1P06400 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RB1P06400 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RB1P06400 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RB1P06400 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RB1P06400 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RB1P06400 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RB1P06400 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.09■□□□□ 0.97
RB1P06400 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RB1P06400 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.09■□□□□ 0.97
RB1P06400 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RB1P06400 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RB1P06400 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RB1P06400 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RB1P06400 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RB1P06400 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RB1P06400 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RB1P06400 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.08■□□□□ 0.97
RB1P06400 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RB1P06400 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
RB1P06400 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.08■□□□□ 0.97
RB1P06400 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.08■□□□□ 0.97
RB1P06400 TFP1-202ENST00000475455 1573 ntBASIC21.08■□□□□ 0.97
RB1P06400 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RB1P06400 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.08■□□□□ 0.97
RB1P06400 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RB1P06400 SLC25A1P4-201ENST00000567977 778 ntBASIC21.08■□□□□ 0.97
RB1P06400 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.08■□□□□ 0.97
RB1P06400 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.08■□□□□ 0.97
RB1P06400 AL358472.4-201ENST00000633140 710 ntBASIC21.08■□□□□ 0.97
RB1P06400 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RB1P06400 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RB1P06400 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
RB1P06400 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RB1P06400 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RB1P06400 AC079834.2-201ENST00000609776 1949 ntBASIC21.08■□□□□ 0.96
RB1P06400 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.08■□□□□ 0.96
RB1P06400 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.08■□□□□ 0.96
RB1P06400 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms