Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGN1P05114 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGN1P05114 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGN1P05114 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMGN1P05114 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGN1P05114 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGN1P05114 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.99■□□□□ 0.47
HMGN1P05114 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.99■□□□□ 0.47
HMGN1P05114 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGN1P05114 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGN1P05114 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGN1P05114 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGN1P05114 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.98■□□□□ 0.47
HMGN1P05114 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.98■□□□□ 0.47
HMGN1P05114 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGN1P05114 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGN1P05114 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGN1P05114 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.98■□□□□ 0.47
HMGN1P05114 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGN1P05114 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.98■□□□□ 0.47
HMGN1P05114 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
HMGN1P05114 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.98■□□□□ 0.47
HMGN1P05114 Z82202.1-201ENST00000623446 1880 ntBASIC17.98■□□□□ 0.47
HMGN1P05114 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGN1P05114 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
HMGN1P05114 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGN1P05114 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
HMGN1P05114 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.98■□□□□ 0.47
HMGN1P05114 KRT16P6-202ENST00000425692 1426 ntBASIC17.98■□□□□ 0.47
HMGN1P05114 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGN1P05114 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HMGN1P05114 CYP21A1P-202ENST00000354927 1481 ntBASIC17.97■□□□□ 0.47
HMGN1P05114 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGN1P05114 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
HMGN1P05114 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGN1P05114 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.97■□□□□ 0.47
HMGN1P05114 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
HMGN1P05114 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
HMGN1P05114 TNXA-203ENST00000507684 2038 ntBASIC17.97■□□□□ 0.47
HMGN1P05114 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGN1P05114 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMGN1P05114 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGN1P05114 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.97■□□□□ 0.47
HMGN1P05114 KRT8P17-201ENST00000453110 1448 ntBASIC17.97■□□□□ 0.47
HMGN1P05114 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
HMGN1P05114 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
HMGN1P05114 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
HMGN1P05114 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.96■□□□□ 0.47
HMGN1P05114 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.96■□□□□ 0.47
HMGN1P05114 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGN1P05114 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGN1P05114 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMGN1P05114 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.96■□□□□ 0.47
HMGN1P05114 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.96■□□□□ 0.47
HMGN1P05114 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
HMGN1P05114 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
HMGN1P05114 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGN1P05114 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGN1P05114 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGN1P05114 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGN1P05114 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMGN1P05114 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMGN1P05114 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
HMGN1P05114 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
HMGN1P05114 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.96■□□□□ 0.47
HMGN1P05114 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMGN1P05114 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.96■□□□□ 0.47
HMGN1P05114 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.96■□□□□ 0.47
HMGN1P05114 MYCNOS-205ENST00000641950 531 ntBASIC17.96■□□□□ 0.47
HMGN1P05114 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.96■□□□□ 0.47
HMGN1P05114 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HMGN1P05114 AC120498.9-201ENST00000339021 3867 ntBASIC17.96■□□□□ 0.47
HMGN1P05114 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMGN1P05114 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.96■□□□□ 0.47
HMGN1P05114 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HMGN1P05114 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.96■□□□□ 0.47
HMGN1P05114 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
HMGN1P05114 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HMGN1P05114 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGN1P05114 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGN1P05114 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGN1P05114 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGN1P05114 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGN1P05114 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMGN1P05114 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGN1P05114 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMGN1P05114 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGN1P05114 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGN1P05114 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
HMGN1P05114 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.95■□□□□ 0.46
HMGN1P05114 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.95■□□□□ 0.46
HMGN1P05114 UBE2DNL-204ENST00000602536 740 ntBASIC17.95■□□□□ 0.46
HMGN1P05114 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.95■□□□□ 0.46
HMGN1P05114 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.95■□□□□ 0.46
HMGN1P05114 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.95■□□□□ 0.46
HMGN1P05114 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HMGN1P05114 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
HMGN1P05114 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HMGN1P05114 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HMGN1P05114 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms