Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
MT-CO1P00395 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-CO1P00395 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-CO1P00395 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-CO1P00395 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-CO1P00395 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-CO1P00395 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MT-CO1P00395 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
MT-CO1P00395 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MT-CO1P00395 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
MT-CO1P00395 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MT-CO1P00395 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-CO1P00395 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.37■□□□□ 0.85
MT-CO1P00395 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.37■□□□□ 0.85
MT-CO1P00395 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-CO1P00395 AL158047.1-201ENST00000445918 881 ntBASIC20.37■□□□□ 0.85
MT-CO1P00395 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.37■□□□□ 0.85
MT-CO1P00395 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.37■□□□□ 0.85
MT-CO1P00395 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.37■□□□□ 0.85
MT-CO1P00395 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.37■□□□□ 0.85
MT-CO1P00395 AC066615.1-201ENST00000640911 628 ntBASIC20.37■□□□□ 0.85
MT-CO1P00395 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-CO1P00395 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-CO1P00395 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.37■□□□□ 0.85
MT-CO1P00395 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MT-CO1P00395 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-CO1P00395 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-CO1P00395 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.37■□□□□ 0.85
MT-CO1P00395 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MT-CO1P00395 KRT8P17-201ENST00000453110 1448 ntBASIC20.36■□□□□ 0.85
MT-CO1P00395 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-CO1P00395 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.36■□□□□ 0.85
MT-CO1P00395 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-CO1P00395 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-CO1P00395 PCDHAC2-203ENST00000615316 3011 ntBASIC20.36■□□□□ 0.85
MT-CO1P00395 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-CO1P00395 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-CO1P00395 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-CO1P00395 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
MT-CO1P00395 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
MT-CO1P00395 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MT-CO1P00395 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.36■□□□□ 0.85
MT-CO1P00395 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.36■□□□□ 0.85
MT-CO1P00395 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
MT-CO1P00395 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.36■□□□□ 0.85
MT-CO1P00395 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.36■□□□□ 0.85
MT-CO1P00395 AL031963.3-201ENST00000606441 850 ntBASIC20.36■□□□□ 0.85
MT-CO1P00395 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.36■□□□□ 0.85
MT-CO1P00395 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-CO1P00395 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-CO1P00395 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MT-CO1P00395 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.36■□□□□ 0.85
MT-CO1P00395 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-CO1P00395 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.36■□□□□ 0.85
MT-CO1P00395 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MT-CO1P00395 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.36■□□□□ 0.85
MT-CO1P00395 KRT8P20-201ENST00000423953 1409 ntBASIC20.36■□□□□ 0.85
MT-CO1P00395 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.36■□□□□ 0.85
MT-CO1P00395 AL391422.3-201ENST00000603791 2761 ntBASIC20.35■□□□□ 0.85
MT-CO1P00395 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MT-CO1P00395 AC020907.5-201ENST00000624372 1936 ntBASIC20.35■□□□□ 0.85
MT-CO1P00395 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MT-CO1P00395 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.35■□□□□ 0.85
MT-CO1P00395 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
MT-CO1P00395 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MT-CO1P00395 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MT-CO1P00395 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MT-CO1P00395 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.35■□□□□ 0.85
MT-CO1P00395 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MT-CO1P00395 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.35■□□□□ 0.85
MT-CO1P00395 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.35■□□□□ 0.85
MT-CO1P00395 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.35■□□□□ 0.85
MT-CO1P00395 MTDHP1-201ENST00000605323 784 ntBASIC20.35■□□□□ 0.85
MT-CO1P00395 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MT-CO1P00395 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MT-CO1P00395 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.35■□□□□ 0.85
MT-CO1P00395 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
MT-CO1P00395 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
MT-CO1P00395 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MT-CO1P00395 HLA-G-202ENST00000376815 851 ntBASIC20.34■□□□□ 0.85
MT-CO1P00395 HLA-G-203ENST00000376818 1127 ntBASIC20.34■□□□□ 0.85
MT-CO1P00395 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
MT-CO1P00395 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MT-CO1P00395 RPPH1-201ENST00000516869 333 ntBASIC20.34■□□□□ 0.85
MT-CO1P00395 C1QBPP2-201ENST00000528754 825 ntBASIC20.34■□□□□ 0.85
MT-CO1P00395 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.34■□□□□ 0.85
MT-CO1P00395 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.34■□□□□ 0.85
MT-CO1P00395 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MT-CO1P00395 AL359736.2-201ENST00000621992 437 ntBASIC20.34■□□□□ 0.85
MT-CO1P00395 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
MT-CO1P00395 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.34■□□□□ 0.85
MT-CO1P00395 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MT-CO1P00395 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MT-CO1P00395 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MT-CO1P00395 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
MT-CO1P00395 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MT-CO1P00395 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MT-CO1P00395 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.33■□□□□ 0.85
MT-CO1P00395 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MT-CO1P00395 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms