Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RCC2P6-201ENST00000526625 1557 ntBASIC22.84■■□□□ 1.25
ALDH1A1P00352 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
ALDH1A1P00352 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.83■■□□□ 1.25
ALDH1A1P00352 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
ALDH1A1P00352 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.83■■□□□ 1.25
ALDH1A1P00352 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.83■■□□□ 1.25
ALDH1A1P00352 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.83■■□□□ 1.25
ALDH1A1P00352 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.83■■□□□ 1.25
ALDH1A1P00352 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.83■■□□□ 1.25
ALDH1A1P00352 AC004951.3-201ENST00000418645 1148 ntBASIC22.83■■□□□ 1.25
ALDH1A1P00352 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.83■■□□□ 1.25
ALDH1A1P00352 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC22.83■■□□□ 1.25
ALDH1A1P00352 KRT18P16-201ENST00000510337 1294 ntBASIC22.83■■□□□ 1.25
ALDH1A1P00352 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC22.83■■□□□ 1.25
ALDH1A1P00352 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.83■■□□□ 1.25
ALDH1A1P00352 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
ALDH1A1P00352 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
ALDH1A1P00352 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.24
ALDH1A1P00352 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
ALDH1A1P00352 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.83■■□□□ 1.24
ALDH1A1P00352 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
ALDH1A1P00352 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC22.82■■□□□ 1.24
ALDH1A1P00352 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.82■■□□□ 1.24
ALDH1A1P00352 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ALDH1A1P00352 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ALDH1A1P00352 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
ALDH1A1P00352 BET1L-202ENST00000332865 533 ntTSL 5 BASIC22.82■■□□□ 1.24
ALDH1A1P00352 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC22.82■■□□□ 1.24
ALDH1A1P00352 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ALDH1A1P00352 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC22.82■■□□□ 1.24
ALDH1A1P00352 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
ALDH1A1P00352 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ALDH1A1P00352 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ALDH1A1P00352 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
ALDH1A1P00352 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
ALDH1A1P00352 AC092338.2-201ENST00000568827 1415 ntBASIC22.82■■□□□ 1.24
ALDH1A1P00352 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC22.82■■□□□ 1.24
ALDH1A1P00352 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
ALDH1A1P00352 AC005332.1-201ENST00000577698 1310 ntBASIC22.82■■□□□ 1.24
ALDH1A1P00352 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ALDH1A1P00352 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
ALDH1A1P00352 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC22.81■■□□□ 1.24
ALDH1A1P00352 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
ALDH1A1P00352 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.81■■□□□ 1.24
ALDH1A1P00352 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ALDH1A1P00352 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ALDH1A1P00352 TSPY17P-201ENST00000450329 467 ntBASIC22.81■■□□□ 1.24
ALDH1A1P00352 GXYLT1P6-201ENST00000456472 1187 ntBASIC22.81■■□□□ 1.24
ALDH1A1P00352 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
ALDH1A1P00352 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.81■■□□□ 1.24
ALDH1A1P00352 AC140113.3-201ENST00000605663 199 ntBASIC22.81■■□□□ 1.24
ALDH1A1P00352 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC22.81■■□□□ 1.24
ALDH1A1P00352 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.81■■□□□ 1.24
ALDH1A1P00352 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ALDH1A1P00352 KRT8P17-201ENST00000453110 1448 ntBASIC22.81■■□□□ 1.24
ALDH1A1P00352 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC22.81■■□□□ 1.24
ALDH1A1P00352 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
ALDH1A1P00352 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.8■■□□□ 1.24
ALDH1A1P00352 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ALDH1A1P00352 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
ALDH1A1P00352 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
ALDH1A1P00352 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.8■■□□□ 1.24
ALDH1A1P00352 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
ALDH1A1P00352 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
ALDH1A1P00352 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
ALDH1A1P00352 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC22.8■■□□□ 1.24
ALDH1A1P00352 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ALDH1A1P00352 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.8■■□□□ 1.24
ALDH1A1P00352 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ALDH1A1P00352 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
ALDH1A1P00352 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ALDH1A1P00352 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ALDH1A1P00352 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
ALDH1A1P00352 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC22.79■■□□□ 1.24
ALDH1A1P00352 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ALDH1A1P00352 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
ALDH1A1P00352 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ALDH1A1P00352 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.79■■□□□ 1.24
ALDH1A1P00352 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
ALDH1A1P00352 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC22.79■■□□□ 1.24
ALDH1A1P00352 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ALDH1A1P00352 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC22.79■■□□□ 1.24
ALDH1A1P00352 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.79■■□□□ 1.24
ALDH1A1P00352 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC22.79■■□□□ 1.24
ALDH1A1P00352 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ALDH1A1P00352 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
ALDH1A1P00352 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC22.79■■□□□ 1.24
ALDH1A1P00352 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.79■■□□□ 1.24
ALDH1A1P00352 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
ALDH1A1P00352 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC22.79■■□□□ 1.24
ALDH1A1P00352 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
ALDH1A1P00352 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.79■■□□□ 1.24
ALDH1A1P00352 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
ALDH1A1P00352 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC22.78■■□□□ 1.24
ALDH1A1P00352 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ALDH1A1P00352 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ALDH1A1P00352 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
ALDH1A1P00352 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC22.78■■□□□ 1.24
ALDH1A1P00352 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22.78■■□□□ 1.24
ALDH1A1P00352 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms