Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TRUB2O95900 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRUB2O95900 HLA-G-202ENST00000376815 851 ntBASIC20.87■□□□□ 0.93
TRUB2O95900 HLA-G-203ENST00000376818 1127 ntBASIC20.87■□□□□ 0.93
TRUB2O95900 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.87■□□□□ 0.93
TRUB2O95900 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.87■□□□□ 0.93
TRUB2O95900 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.87■□□□□ 0.93
TRUB2O95900 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRUB2O95900 SOX15-203ENST00000570788 1093 ntBASIC20.87■□□□□ 0.93
TRUB2O95900 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
TRUB2O95900 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRUB2O95900 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRUB2O95900 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.87■□□□□ 0.93
TRUB2O95900 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRUB2O95900 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.87■□□□□ 0.93
TRUB2O95900 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRUB2O95900 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRUB2O95900 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRUB2O95900 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRUB2O95900 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.86■□□□□ 0.93
TRUB2O95900 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRUB2O95900 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TRUB2O95900 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.86■□□□□ 0.93
TRUB2O95900 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRUB2O95900 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
TRUB2O95900 UNC93B4-201ENST00000505679 747 ntBASIC20.86■□□□□ 0.93
TRUB2O95900 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRUB2O95900 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TRUB2O95900 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.86■□□□□ 0.93
TRUB2O95900 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRUB2O95900 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRUB2O95900 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRUB2O95900 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.86■□□□□ 0.93
TRUB2O95900 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRUB2O95900 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TRUB2O95900 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.85■□□□□ 0.93
TRUB2O95900 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRUB2O95900 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRUB2O95900 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRUB2O95900 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRUB2O95900 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRUB2O95900 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.85■□□□□ 0.93
TRUB2O95900 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TRUB2O95900 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TRUB2O95900 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.85■□□□□ 0.93
TRUB2O95900 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.85■□□□□ 0.93
TRUB2O95900 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.85■□□□□ 0.93
TRUB2O95900 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.85■□□□□ 0.93
TRUB2O95900 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRUB2O95900 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.85■□□□□ 0.93
TRUB2O95900 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.85■□□□□ 0.93
TRUB2O95900 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRUB2O95900 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
TRUB2O95900 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB2O95900 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB2O95900 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB2O95900 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB2O95900 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB2O95900 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
TRUB2O95900 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB2O95900 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.84■□□□□ 0.93
TRUB2O95900 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB2O95900 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB2O95900 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB2O95900 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TRUB2O95900 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
TRUB2O95900 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.84■□□□□ 0.93
TRUB2O95900 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.84■□□□□ 0.93
TRUB2O95900 AP003097.1-201ENST00000530657 1135 ntBASIC20.84■□□□□ 0.93
TRUB2O95900 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.84■□□□□ 0.93
TRUB2O95900 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.84■□□□□ 0.93
TRUB2O95900 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB2O95900 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.84■□□□□ 0.93
TRUB2O95900 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.84■□□□□ 0.93
TRUB2O95900 AC008403.3-201ENST00000598924 454 ntBASIC20.84■□□□□ 0.93
TRUB2O95900 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.84■□□□□ 0.93
TRUB2O95900 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB2O95900 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB2O95900 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB2O95900 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TRUB2O95900 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.84■□□□□ 0.93
TRUB2O95900 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TRUB2O95900 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB2O95900 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRUB2O95900 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.83■□□□□ 0.93
TRUB2O95900 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRUB2O95900 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TRUB2O95900 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
TRUB2O95900 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRUB2O95900 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRUB2O95900 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRUB2O95900 ESRRAP1-201ENST00000400596 1257 ntBASIC20.83■□□□□ 0.93
TRUB2O95900 TSPY20P-201ENST00000450910 630 ntBASIC20.83■□□□□ 0.93
TRUB2O95900 AC026366.1-201ENST00000488803 879 ntBASIC20.83■□□□□ 0.93
TRUB2O95900 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TRUB2O95900 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.83■□□□□ 0.93
TRUB2O95900 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.83■□□□□ 0.93
TRUB2O95900 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.83■□□□□ 0.93
TRUB2O95900 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.83■□□□□ 0.93
TRUB2O95900 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms