Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
GGPS1O95749 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
GGPS1O95749 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC22.37■■□□□ 1.17
GGPS1O95749 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
GGPS1O95749 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
GGPS1O95749 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
GGPS1O95749 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
GGPS1O95749 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.37■■□□□ 1.17
GGPS1O95749 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.37■■□□□ 1.17
GGPS1O95749 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
GGPS1O95749 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
GGPS1O95749 ECEL1P3-201ENST00000427961 737 ntBASIC22.37■■□□□ 1.17
GGPS1O95749 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
GGPS1O95749 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC22.37■■□□□ 1.17
GGPS1O95749 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.37■■□□□ 1.17
GGPS1O95749 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.37■■□□□ 1.17
GGPS1O95749 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
GGPS1O95749 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC22.37■■□□□ 1.17
GGPS1O95749 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
GGPS1O95749 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.37■■□□□ 1.17
GGPS1O95749 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
GGPS1O95749 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
GGPS1O95749 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
GGPS1O95749 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
GGPS1O95749 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC22.36■■□□□ 1.17
GGPS1O95749 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.36■■□□□ 1.17
GGPS1O95749 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC22.36■■□□□ 1.17
GGPS1O95749 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.36■■□□□ 1.17
GGPS1O95749 AC211429.1-201ENST00000415277 523 ntBASIC22.36■■□□□ 1.17
GGPS1O95749 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.36■■□□□ 1.17
GGPS1O95749 AL353807.1-201ENST00000427475 662 ntBASIC22.36■■□□□ 1.17
GGPS1O95749 RPS20-210ENST00000523936 899 ntTSL 2 BASIC22.36■■□□□ 1.17
GGPS1O95749 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC22.36■■□□□ 1.17
GGPS1O95749 AL355075.4-201ENST00000554988 638 ntBASIC22.36■■□□□ 1.17
GGPS1O95749 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.36■■□□□ 1.17
GGPS1O95749 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
GGPS1O95749 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
GGPS1O95749 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
GGPS1O95749 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
GGPS1O95749 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
GGPS1O95749 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
GGPS1O95749 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.35■■□□□ 1.17
GGPS1O95749 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
GGPS1O95749 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.35■■□□□ 1.17
GGPS1O95749 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC22.35■■□□□ 1.17
GGPS1O95749 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
GGPS1O95749 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
GGPS1O95749 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
GGPS1O95749 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.35■■□□□ 1.17
GGPS1O95749 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
GGPS1O95749 FDX2-207ENST00000494368 584 ntTSL 4 BASIC22.35■■□□□ 1.17
GGPS1O95749 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.35■■□□□ 1.17
GGPS1O95749 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.35■■□□□ 1.17
GGPS1O95749 CD177P1-201ENST00000606252 935 ntBASIC22.35■■□□□ 1.17
GGPS1O95749 AC026471.5-201ENST00000615068 467 ntBASIC22.35■■□□□ 1.17
GGPS1O95749 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC22.35■■□□□ 1.17
GGPS1O95749 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.35■■□□□ 1.17
GGPS1O95749 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
GGPS1O95749 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
GGPS1O95749 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
GGPS1O95749 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
GGPS1O95749 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
GGPS1O95749 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
GGPS1O95749 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
GGPS1O95749 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
GGPS1O95749 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
GGPS1O95749 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
GGPS1O95749 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
GGPS1O95749 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
GGPS1O95749 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC22.34■■□□□ 1.17
GGPS1O95749 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
GGPS1O95749 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
GGPS1O95749 FAM197Y1-201ENST00000421178 764 ntBASIC22.34■■□□□ 1.17
GGPS1O95749 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC22.34■■□□□ 1.17
GGPS1O95749 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.34■■□□□ 1.17
GGPS1O95749 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.34■■□□□ 1.17
GGPS1O95749 SNX21-213ENST00000614929 587 ntTSL 5 BASIC22.34■■□□□ 1.17
GGPS1O95749 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
GGPS1O95749 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
GGPS1O95749 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
GGPS1O95749 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
GGPS1O95749 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC22.34■■□□□ 1.17
GGPS1O95749 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
GGPS1O95749 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
GGPS1O95749 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
GGPS1O95749 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.33■■□□□ 1.17
GGPS1O95749 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
GGPS1O95749 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
GGPS1O95749 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
GGPS1O95749 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.33■■□□□ 1.17
GGPS1O95749 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
GGPS1O95749 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC22.33■■□□□ 1.17
GGPS1O95749 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.33■■□□□ 1.17
GGPS1O95749 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC22.33■■□□□ 1.17
GGPS1O95749 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.33■■□□□ 1.17
GGPS1O95749 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.33■■□□□ 1.17
GGPS1O95749 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
GGPS1O95749 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
GGPS1O95749 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
GGPS1O95749 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms