Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.64■□□□□ 0.57
SNX4O95219 AL356652.1-201ENST00000615962 565 ntBASIC18.64■□□□□ 0.57
SNX4O95219 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.64■□□□□ 0.57
SNX4O95219 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
SNX4O95219 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SNX4O95219 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SNX4O95219 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
SNX4O95219 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX4O95219 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SNX4O95219 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
SNX4O95219 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
SNX4O95219 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.63■□□□□ 0.57
SNX4O95219 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNX4O95219 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SNX4O95219 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX4O95219 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX4O95219 CD99P1-205ENST00000527459 561 ntBASIC18.63■□□□□ 0.57
SNX4O95219 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.63■□□□□ 0.57
SNX4O95219 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.63■□□□□ 0.57
SNX4O95219 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SNX4O95219 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX4O95219 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNX4O95219 AC073314.1-201ENST00000568729 2216 ntBASIC18.63■□□□□ 0.57
SNX4O95219 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX4O95219 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX4O95219 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX4O95219 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.63■□□□□ 0.57
SNX4O95219 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX4O95219 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.63■□□□□ 0.57
SNX4O95219 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.63■□□□□ 0.57
SNX4O95219 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX4O95219 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SNX4O95219 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX4O95219 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SNX4O95219 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SNX4O95219 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SNX4O95219 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.63■□□□□ 0.57
SNX4O95219 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX4O95219 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNX4O95219 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.62■□□□□ 0.57
SNX4O95219 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX4O95219 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SNX4O95219 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX4O95219 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX4O95219 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.62■□□□□ 0.57
SNX4O95219 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNX4O95219 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SNX4O95219 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNX4O95219 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.62■□□□□ 0.57
SNX4O95219 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
SNX4O95219 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.62■□□□□ 0.57
SNX4O95219 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
SNX4O95219 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNX4O95219 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
SNX4O95219 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SNX4O95219 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SNX4O95219 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
SNX4O95219 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX4O95219 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.62■□□□□ 0.57
SNX4O95219 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX4O95219 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX4O95219 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX4O95219 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.62■□□□□ 0.57
SNX4O95219 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SNX4O95219 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX4O95219 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX4O95219 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX4O95219 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX4O95219 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX4O95219 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX4O95219 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNX4O95219 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.61■□□□□ 0.57
SNX4O95219 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNX4O95219 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNX4O95219 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.61■□□□□ 0.57
SNX4O95219 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.61■□□□□ 0.57
SNX4O95219 AC083880.1-201ENST00000608266 535 ntBASIC18.61■□□□□ 0.57
SNX4O95219 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX4O95219 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
SNX4O95219 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNX4O95219 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SNX4O95219 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.61■□□□□ 0.57
SNX4O95219 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.61■□□□□ 0.57
SNX4O95219 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SNX4O95219 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNX4O95219 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.61■□□□□ 0.57
SNX4O95219 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SNX4O95219 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNX4O95219 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.6■□□□□ 0.57
SNX4O95219 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX4O95219 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNX4O95219 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNX4O95219 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX4O95219 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.6■□□□□ 0.57
SNX4O95219 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX4O95219 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX4O95219 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX4O95219 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX4O95219 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNX4O95219 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms