Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM3O75382 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRIM3O75382 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TRIM3O75382 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM3O75382 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM3O75382 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRIM3O75382 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM3O75382 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM3O75382 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM3O75382 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM3O75382 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM3O75382 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TRIM3O75382 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM3O75382 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM3O75382 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM3O75382 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM3O75382 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
TRIM3O75382 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRIM3O75382 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM3O75382 POU5F1P3-201ENST00000428824 1078 ntBASIC18.49■□□□□ 0.55
TRIM3O75382 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM3O75382 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM3O75382 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM3O75382 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM3O75382 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM3O75382 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM3O75382 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM3O75382 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM3O75382 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM3O75382 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM3O75382 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRIM3O75382 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM3O75382 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM3O75382 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM3O75382 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TRIM3O75382 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM3O75382 GABARAPL3-202ENST00000624044 1851 ntBASIC18.48■□□□□ 0.55
TRIM3O75382 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM3O75382 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM3O75382 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM3O75382 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
TRIM3O75382 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM3O75382 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM3O75382 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
TRIM3O75382 FAM201B-201ENST00000458407 597 ntBASIC18.48■□□□□ 0.55
TRIM3O75382 PNMA6B-201ENST00000538162 1200 ntBASIC18.48■□□□□ 0.55
TRIM3O75382 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM3O75382 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM3O75382 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM3O75382 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM3O75382 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TRIM3O75382 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
TRIM3O75382 AIRN-201ENST00000601203 4374 ntBASIC18.48■□□□□ 0.55
TRIM3O75382 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM3O75382 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TRIM3O75382 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM3O75382 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM3O75382 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TRIM3O75382 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM3O75382 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM3O75382 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM3O75382 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM3O75382 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM3O75382 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TRIM3O75382 AC092368.3-202ENST00000574180 1591 ntBASIC18.47■□□□□ 0.55
TRIM3O75382 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM3O75382 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM3O75382 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM3O75382 AC007225.1-201ENST00000566331 1836 ntBASIC18.47■□□□□ 0.55
TRIM3O75382 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM3O75382 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM3O75382 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM3O75382 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM3O75382 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM3O75382 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIM3O75382 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM3O75382 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM3O75382 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM3O75382 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM3O75382 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM3O75382 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM3O75382 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIM3O75382 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM3O75382 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM3O75382 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TRIM3O75382 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM3O75382 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.46■□□□□ 0.55
TRIM3O75382 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM3O75382 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
TRIM3O75382 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM3O75382 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM3O75382 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM3O75382 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM3O75382 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM3O75382 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM3O75382 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM3O75382 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRIM3O75382 ESRRAP1-201ENST00000400596 1257 ntBASIC18.46■□□□□ 0.55
TRIM3O75382 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.46■□□□□ 0.55
TRIM3O75382 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms