Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.68■□□□□ 0.74
KLHL41O60662 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL41O60662 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL41O60662 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL41O60662 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL41O60662 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.68■□□□□ 0.74
KLHL41O60662 POU5F1P4-201ENST00000413175 1085 ntBASIC19.68■□□□□ 0.74
KLHL41O60662 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
KLHL41O60662 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL41O60662 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL41O60662 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.68■□□□□ 0.74
KLHL41O60662 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.68■□□□□ 0.74
KLHL41O60662 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.68■□□□□ 0.74
KLHL41O60662 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
KLHL41O60662 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
KLHL41O60662 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
KLHL41O60662 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.68■□□□□ 0.74
KLHL41O60662 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL41O60662 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL41O60662 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL41O60662 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.67■□□□□ 0.74
KLHL41O60662 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL41O60662 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL41O60662 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
KLHL41O60662 ABHD17AP1-201ENST00000358206 933 ntBASIC19.67■□□□□ 0.74
KLHL41O60662 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.67■□□□□ 0.74
KLHL41O60662 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL41O60662 AC245052.3-201ENST00000450182 901 ntBASIC19.67■□□□□ 0.74
KLHL41O60662 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL41O60662 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.67■□□□□ 0.74
KLHL41O60662 AL050303.2-201ENST00000619798 666 ntBASIC19.67■□□□□ 0.74
KLHL41O60662 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.67■□□□□ 0.74
KLHL41O60662 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
KLHL41O60662 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL41O60662 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL41O60662 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
KLHL41O60662 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
KLHL41O60662 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
KLHL41O60662 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
KLHL41O60662 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHL41O60662 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
KLHL41O60662 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHL41O60662 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHL41O60662 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
KLHL41O60662 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHL41O60662 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHL41O60662 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KLHL41O60662 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.66■□□□□ 0.74
KLHL41O60662 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.66■□□□□ 0.74
KLHL41O60662 TERF1P5-201ENST00000477545 1207 ntBASIC19.66■□□□□ 0.74
KLHL41O60662 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
KLHL41O60662 AC007322.4-201ENST00000509611 723 ntBASIC19.66■□□□□ 0.74
KLHL41O60662 KRT18P6-201ENST00000555540 1265 ntBASIC19.66■□□□□ 0.74
KLHL41O60662 AL138781.1-201ENST00000566567 1274 ntBASIC19.66■□□□□ 0.74
KLHL41O60662 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
KLHL41O60662 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.66■□□□□ 0.74
KLHL41O60662 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.66■□□□□ 0.74
KLHL41O60662 AC008694.1-202ENST00000636953 945 ntBASIC19.66■□□□□ 0.74
KLHL41O60662 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.66■□□□□ 0.74
KLHL41O60662 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
KLHL41O60662 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.66■□□□□ 0.74
KLHL41O60662 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.66■□□□□ 0.74
KLHL41O60662 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHL41O60662 AL691432.2-201ENST00000607222 2038 ntBASIC19.66■□□□□ 0.74
KLHL41O60662 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
KLHL41O60662 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.66■□□□□ 0.74
KLHL41O60662 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLHL41O60662 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLHL41O60662 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KLHL41O60662 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLHL41O60662 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLHL41O60662 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLHL41O60662 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLHL41O60662 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
KLHL41O60662 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLHL41O60662 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.65■□□□□ 0.74
KLHL41O60662 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.65■□□□□ 0.74
KLHL41O60662 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.65■□□□□ 0.74
KLHL41O60662 AC105036.2-201ENST00000569468 176 ntBASIC19.65■□□□□ 0.74
KLHL41O60662 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.65■□□□□ 0.74
KLHL41O60662 MIR4758-201ENST00000577688 71 ntBASIC19.65■□□□□ 0.74
KLHL41O60662 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
KLHL41O60662 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLHL41O60662 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.65■□□□□ 0.74
KLHL41O60662 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.65■□□□□ 0.74
KLHL41O60662 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.65■□□□□ 0.74
KLHL41O60662 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLHL41O60662 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLHL41O60662 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLHL41O60662 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.65■□□□□ 0.74
KLHL41O60662 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLHL41O60662 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
KLHL41O60662 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
KLHL41O60662 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.64■□□□□ 0.74
KLHL41O60662 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
KLHL41O60662 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.64■□□□□ 0.74
KLHL41O60662 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
KLHL41O60662 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
KLHL41O60662 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
KLHL41O60662 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms