Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COCHO43405 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
COCHO43405 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
COCHO43405 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.62■□□□□ 0.89
COCHO43405 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.61■□□□□ 0.89
COCHO43405 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COCHO43405 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COCHO43405 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.61■□□□□ 0.89
COCHO43405 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COCHO43405 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COCHO43405 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
COCHO43405 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COCHO43405 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COCHO43405 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
COCHO43405 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COCHO43405 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.61■□□□□ 0.89
COCHO43405 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COCHO43405 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
COCHO43405 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
COCHO43405 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
COCHO43405 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.61■□□□□ 0.89
COCHO43405 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.61■□□□□ 0.89
COCHO43405 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.61■□□□□ 0.89
COCHO43405 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COCHO43405 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COCHO43405 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.61■□□□□ 0.89
COCHO43405 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
COCHO43405 AC018553.1-201ENST00000616682 1458 ntBASIC20.61■□□□□ 0.89
COCHO43405 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
COCHO43405 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COCHO43405 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COCHO43405 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.6■□□□□ 0.89
COCHO43405 TFP1-202ENST00000475455 1573 ntBASIC20.6■□□□□ 0.89
COCHO43405 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.6■□□□□ 0.89
COCHO43405 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
COCHO43405 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.6■□□□□ 0.89
COCHO43405 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.6■□□□□ 0.89
COCHO43405 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.6■□□□□ 0.89
COCHO43405 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.6■□□□□ 0.89
COCHO43405 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COCHO43405 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
COCHO43405 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
COCHO43405 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.6■□□□□ 0.89
COCHO43405 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
COCHO43405 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
COCHO43405 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.6■□□□□ 0.89
COCHO43405 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COCHO43405 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COCHO43405 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.59■□□□□ 0.89
COCHO43405 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COCHO43405 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COCHO43405 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COCHO43405 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
COCHO43405 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.59■□□□□ 0.89
COCHO43405 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COCHO43405 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.59■□□□□ 0.89
COCHO43405 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.59■□□□□ 0.89
COCHO43405 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.59■□□□□ 0.89
COCHO43405 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.59■□□□□ 0.89
COCHO43405 PHGDH-210ENST00000641115 1638 ntBASIC20.59■□□□□ 0.89
COCHO43405 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.59■□□□□ 0.89
COCHO43405 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
COCHO43405 BX119927.1-201ENST00000636596 1552 ntBASIC20.59■□□□□ 0.89
COCHO43405 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COCHO43405 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COCHO43405 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
COCHO43405 AP006587.1-201ENST00000534129 1502 ntBASIC20.58■□□□□ 0.89
COCHO43405 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
COCHO43405 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COCHO43405 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.58■□□□□ 0.89
COCHO43405 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
COCHO43405 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.58■□□□□ 0.89
COCHO43405 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
COCHO43405 AP005212.1-201ENST00000581547 1997 ntBASIC20.58■□□□□ 0.89
COCHO43405 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COCHO43405 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COCHO43405 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
COCHO43405 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.58■□□□□ 0.89
COCHO43405 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.58■□□□□ 0.89
COCHO43405 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.58■□□□□ 0.89
COCHO43405 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.58■□□□□ 0.89
COCHO43405 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.58■□□□□ 0.89
COCHO43405 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.58■□□□□ 0.89
COCHO43405 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.58■□□□□ 0.89
COCHO43405 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.58■□□□□ 0.89
COCHO43405 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.58■□□□□ 0.89
COCHO43405 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.58■□□□□ 0.89
COCHO43405 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COCHO43405 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COCHO43405 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.88
COCHO43405 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COCHO43405 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.57■□□□□ 0.88
COCHO43405 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COCHO43405 KRT17P2-201ENST00000300992 1314 ntBASIC20.57■□□□□ 0.88
COCHO43405 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
COCHO43405 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COCHO43405 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
COCHO43405 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COCHO43405 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COCHO43405 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms