Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARHGEF9O43307 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.36■□□□□ 0.53
ARHGEF9O43307 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
ARHGEF9O43307 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.36■□□□□ 0.53
ARHGEF9O43307 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.36■□□□□ 0.53
ARHGEF9O43307 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.36■□□□□ 0.53
ARHGEF9O43307 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.36■□□□□ 0.53
ARHGEF9O43307 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ARHGEF9O43307 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.36■□□□□ 0.53
ARHGEF9O43307 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.36■□□□□ 0.53
ARHGEF9O43307 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.36■□□□□ 0.53
ARHGEF9O43307 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARHGEF9O43307 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.36■□□□□ 0.53
ARHGEF9O43307 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.36■□□□□ 0.53
ARHGEF9O43307 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARHGEF9O43307 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ARHGEF9O43307 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ARHGEF9O43307 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.35■□□□□ 0.53
ARHGEF9O43307 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.35■□□□□ 0.53
ARHGEF9O43307 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ARHGEF9O43307 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ARHGEF9O43307 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ARHGEF9O43307 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.35■□□□□ 0.53
ARHGEF9O43307 AC116050.2-201ENST00000612102 1779 ntBASIC18.35■□□□□ 0.53
ARHGEF9O43307 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ARHGEF9O43307 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ARHGEF9O43307 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ARHGEF9O43307 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.35■□□□□ 0.53
ARHGEF9O43307 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.35■□□□□ 0.53
ARHGEF9O43307 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ARHGEF9O43307 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.35■□□□□ 0.53
ARHGEF9O43307 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.35■□□□□ 0.53
ARHGEF9O43307 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.35■□□□□ 0.53
ARHGEF9O43307 AC133041.1-202ENST00000642053 222 ntBASIC18.35■□□□□ 0.53
ARHGEF9O43307 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ARHGEF9O43307 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ARHGEF9O43307 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ARHGEF9O43307 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ARHGEF9O43307 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.35■□□□□ 0.53
ARHGEF9O43307 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ARHGEF9O43307 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.35■□□□□ 0.53
ARHGEF9O43307 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ARHGEF9O43307 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ARHGEF9O43307 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ARHGEF9O43307 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARHGEF9O43307 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ARHGEF9O43307 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ARHGEF9O43307 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ARHGEF9O43307 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARHGEF9O43307 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.34■□□□□ 0.53
ARHGEF9O43307 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.34■□□□□ 0.53
ARHGEF9O43307 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.34■□□□□ 0.53
ARHGEF9O43307 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARHGEF9O43307 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARHGEF9O43307 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ARHGEF9O43307 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.34■□□□□ 0.53
ARHGEF9O43307 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.34■□□□□ 0.53
ARHGEF9O43307 AC026471.1-201ENST00000564629 3026 ntBASIC18.34■□□□□ 0.53
ARHGEF9O43307 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARHGEF9O43307 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ARHGEF9O43307 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARHGEF9O43307 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ARHGEF9O43307 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.34■□□□□ 0.53
ARHGEF9O43307 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ARHGEF9O43307 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ARHGEF9O43307 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ARHGEF9O43307 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.33■□□□□ 0.53
ARHGEF9O43307 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
ARHGEF9O43307 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.33■□□□□ 0.53
ARHGEF9O43307 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ARHGEF9O43307 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ARHGEF9O43307 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ARHGEF9O43307 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ARHGEF9O43307 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARHGEF9O43307 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ARHGEF9O43307 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ARHGEF9O43307 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.33■□□□□ 0.52
ARHGEF9O43307 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ARHGEF9O43307 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ARHGEF9O43307 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ARHGEF9O43307 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ARHGEF9O43307 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.33■□□□□ 0.52
ARHGEF9O43307 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ARHGEF9O43307 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.33■□□□□ 0.52
ARHGEF9O43307 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARHGEF9O43307 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.33■□□□□ 0.52
ARHGEF9O43307 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.33■□□□□ 0.52
ARHGEF9O43307 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.33■□□□□ 0.52
ARHGEF9O43307 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ARHGEF9O43307 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ARHGEF9O43307 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ARHGEF9O43307 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ARHGEF9O43307 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF9O43307 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF9O43307 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.32■□□□□ 0.52
ARHGEF9O43307 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF9O43307 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ARHGEF9O43307 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.32■□□□□ 0.52
ARHGEF9O43307 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.32■□□□□ 0.52
ARHGEF9O43307 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms