Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.32■■□□□ 1
SPTLC1O15269 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SPTLC1O15269 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.32■■□□□ 1
SPTLC1O15269 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.32■■□□□ 1
SPTLC1O15269 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SPTLC1O15269 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.32■■□□□ 1
SPTLC1O15269 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
SPTLC1O15269 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
SPTLC1O15269 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
SPTLC1O15269 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.31■■□□□ 1
SPTLC1O15269 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SPTLC1O15269 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.31■■□□□ 1
SPTLC1O15269 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SPTLC1O15269 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SPTLC1O15269 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.31■■□□□ 1
SPTLC1O15269 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.31■■□□□ 1
SPTLC1O15269 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.31■■□□□ 1
SPTLC1O15269 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.31■■□□□ 1
SPTLC1O15269 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.31■■□□□ 1
SPTLC1O15269 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.31■■□□□ 1
SPTLC1O15269 Z99916.2-201ENST00000604037 246 ntBASIC21.31■■□□□ 1
SPTLC1O15269 AC010331.1-201ENST00000611423 582 ntBASIC21.31■■□□□ 1
SPTLC1O15269 AC110285.5-201ENST00000611501 352 ntBASIC21.31■■□□□ 1
SPTLC1O15269 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.31■■□□□ 1
SPTLC1O15269 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.31■■□□□ 1
SPTLC1O15269 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.31■■□□□ 1
SPTLC1O15269 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SPTLC1O15269 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.31■■□□□ 1
SPTLC1O15269 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.31■■□□□ 1
SPTLC1O15269 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SPTLC1O15269 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.3■■□□□ 1
SPTLC1O15269 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SPTLC1O15269 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.3■■□□□ 1
SPTLC1O15269 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SPTLC1O15269 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SPTLC1O15269 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.3■■□□□ 1
SPTLC1O15269 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.3■■□□□ 1
SPTLC1O15269 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.3■■□□□ 1
SPTLC1O15269 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.3■■□□□ 1
SPTLC1O15269 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.3■■□□□ 1
SPTLC1O15269 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.3■■□□□ 1
SPTLC1O15269 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.3■■□□□ 1
SPTLC1O15269 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SPTLC1O15269 AL121906.2-201ENST00000621597 723 ntBASIC21.3■■□□□ 1
SPTLC1O15269 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SPTLC1O15269 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SPTLC1O15269 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SPTLC1O15269 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SPTLC1O15269 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SPTLC1O15269 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.3■■□□□ 1
SPTLC1O15269 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SPTLC1O15269 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.3■■□□□ 1
SPTLC1O15269 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.3■■□□□ 1
SPTLC1O15269 AL157384.1-201ENST00000445995 2473 ntBASIC21.3■■□□□ 1
SPTLC1O15269 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.3■■□□□ 1
SPTLC1O15269 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SPTLC1O15269 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
SPTLC1O15269 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SPTLC1O15269 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SPTLC1O15269 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SPTLC1O15269 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SPTLC1O15269 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SPTLC1O15269 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.29■■□□□ 1
SPTLC1O15269 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SPTLC1O15269 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.29■■□□□ 1
SPTLC1O15269 PRKY-204ENST00000533551 1019 ntBASIC21.29■■□□□ 1
SPTLC1O15269 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SPTLC1O15269 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SPTLC1O15269 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.28■■□□□ 1
SPTLC1O15269 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SPTLC1O15269 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.28■■□□□ 1
SPTLC1O15269 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.28■■□□□ 1
SPTLC1O15269 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SPTLC1O15269 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SPTLC1O15269 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.28■■□□□ 1
SPTLC1O15269 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.28■■□□□ 1
SPTLC1O15269 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.28■■□□□ 1
SPTLC1O15269 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SPTLC1O15269 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
SPTLC1O15269 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.28■■□□□ 1
SPTLC1O15269 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
SPTLC1O15269 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SPTLC1O15269 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.28■■□□□ 1
SPTLC1O15269 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SPTLC1O15269 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SPTLC1O15269 KRT16P6-202ENST00000425692 1426 ntBASIC21.28■■□□□ 1
SPTLC1O15269 AL162377.1-201ENST00000618844 1793 ntBASIC21.28■■□□□ 1
SPTLC1O15269 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.28■■□□□ 1
SPTLC1O15269 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SPTLC1O15269 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SPTLC1O15269 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SPTLC1O15269 BX119927.1-201ENST00000636596 1552 ntBASIC21.27■■□□□ 1
SPTLC1O15269 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SPTLC1O15269 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SPTLC1O15269 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.27■■□□□ 1
SPTLC1O15269 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SPTLC1O15269 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.27■■□□□ 1
SPTLC1O15269 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SPTLC1O15269 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.27■■□□□ 1
SPTLC1O15269 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms