Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
APAF1O14727 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
APAF1O14727 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
APAF1O14727 AC120498.8-201ENST00000614275 531 ntBASIC26.25■■□□□ 1.79
APAF1O14727 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
APAF1O14727 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
APAF1O14727 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
APAF1O14727 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
APAF1O14727 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
APAF1O14727 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC26.24■■□□□ 1.79
APAF1O14727 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
APAF1O14727 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
APAF1O14727 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC26.24■■□□□ 1.79
APAF1O14727 SLC25A24-204ENST00000569674 2357 ntBASIC26.24■■□□□ 1.79
APAF1O14727 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC26.24■■□□□ 1.79
APAF1O14727 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
APAF1O14727 RPS2P52-201ENST00000469610 820 ntBASIC26.24■■□□□ 1.79
APAF1O14727 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
APAF1O14727 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC26.24■■□□□ 1.79
APAF1O14727 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
APAF1O14727 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
APAF1O14727 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
APAF1O14727 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
APAF1O14727 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
APAF1O14727 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC26.23■■□□□ 1.79
APAF1O14727 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC26.23■■□□□ 1.79
APAF1O14727 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC26.23■■□□□ 1.79
APAF1O14727 AC008687.6-201ENST00000596318 630 ntBASIC26.23■■□□□ 1.79
APAF1O14727 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC26.23■■□□□ 1.79
APAF1O14727 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
APAF1O14727 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
APAF1O14727 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
APAF1O14727 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC26.22■■□□□ 1.79
APAF1O14727 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
APAF1O14727 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC26.22■■□□□ 1.79
APAF1O14727 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
APAF1O14727 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
APAF1O14727 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC26.22■■□□□ 1.79
APAF1O14727 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC26.22■■□□□ 1.79
APAF1O14727 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
APAF1O14727 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC26.22■■□□□ 1.79
APAF1O14727 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
APAF1O14727 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
APAF1O14727 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
APAF1O14727 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
APAF1O14727 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC26.21■■□□□ 1.79
APAF1O14727 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
APAF1O14727 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
APAF1O14727 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
APAF1O14727 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
APAF1O14727 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC26.21■■□□□ 1.79
APAF1O14727 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC26.21■■□□□ 1.79
APAF1O14727 AP003097.1-201ENST00000530657 1135 ntBASIC26.21■■□□□ 1.79
APAF1O14727 MMAB-206ENST00000540016 945 ntTSL 3 BASIC26.21■■□□□ 1.79
APAF1O14727 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC26.21■■□□□ 1.79
APAF1O14727 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
APAF1O14727 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
APAF1O14727 PHGDH-210ENST00000641115 1638 ntBASIC26.21■■□□□ 1.79
APAF1O14727 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC26.21■■□□□ 1.79
APAF1O14727 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
APAF1O14727 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
APAF1O14727 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
APAF1O14727 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
APAF1O14727 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
APAF1O14727 AC125437.2-201ENST00000625180 2167 ntBASIC26.2■■□□□ 1.79
APAF1O14727 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
APAF1O14727 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC26.2■■□□□ 1.78
APAF1O14727 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC26.2■■□□□ 1.78
APAF1O14727 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC26.2■■□□□ 1.78
APAF1O14727 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC26.2■■□□□ 1.78
APAF1O14727 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC26.2■■□□□ 1.78
APAF1O14727 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC26.2■■□□□ 1.78
APAF1O14727 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC26.2■■□□□ 1.78
APAF1O14727 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
APAF1O14727 BID-204ENST00000399767 2129 ntTSL 2 BASIC26.2■■□□□ 1.78
APAF1O14727 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC26.19■■□□□ 1.78
APAF1O14727 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
APAF1O14727 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC26.19■■□□□ 1.78
APAF1O14727 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
APAF1O14727 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC26.19■■□□□ 1.78
APAF1O14727 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
APAF1O14727 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
APAF1O14727 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
APAF1O14727 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
APAF1O14727 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
APAF1O14727 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
APAF1O14727 ESRRAP1-201ENST00000400596 1257 ntBASIC26.19■■□□□ 1.78
APAF1O14727 AC026366.1-201ENST00000488803 879 ntBASIC26.19■■□□□ 1.78
APAF1O14727 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC26.19■■□□□ 1.78
APAF1O14727 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC26.19■■□□□ 1.78
APAF1O14727 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
APAF1O14727 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC26.19■■□□□ 1.78
APAF1O14727 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
APAF1O14727 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
APAF1O14727 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC26.19■■□□□ 1.78
APAF1O14727 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
APAF1O14727 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
APAF1O14727 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
APAF1O14727 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC26.18■■□□□ 1.78
APAF1O14727 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms