Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.64■□□□□ 0.41
NPIPB4C9JG80 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.64■□□□□ 0.41
NPIPB4C9JG80 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.64■□□□□ 0.41
NPIPB4C9JG80 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 HLA-B-256ENST00000639848 1089 ntBASIC17.64■□□□□ 0.41
NPIPB4C9JG80 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPB4C9JG80 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.62■□□□□ 0.41
NPIPB4C9JG80 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPB4C9JG80 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPB4C9JG80 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPB4C9JG80 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
NPIPB4C9JG80 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NPIPB4C9JG80 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPB4C9JG80 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.61■□□□□ 0.41
NPIPB4C9JG80 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPB4C9JG80 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPB4C9JG80 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.61■□□□□ 0.41
NPIPB4C9JG80 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.61■□□□□ 0.41
NPIPB4C9JG80 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.61■□□□□ 0.41
NPIPB4C9JG80 AC097658.1-201ENST00000475555 843 ntBASIC17.61■□□□□ 0.41
NPIPB4C9JG80 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.61■□□□□ 0.41
NPIPB4C9JG80 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
NPIPB4C9JG80 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.61■□□□□ 0.41
NPIPB4C9JG80 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms