Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 AC034268.1-201ENST00000441047 882 ntBASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 FAM21FP-204ENST00000608637 956 ntBASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF103-CHMP3A0A140T963 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF103-CHMP3A0A140T963 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF103-CHMP3A0A140T963 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF103-CHMP3A0A140T963 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF103-CHMP3A0A140T963 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF103-CHMP3A0A140T963 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF103-CHMP3A0A140T963 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.1■□□□□ 0.65
RNF103-CHMP3A0A140T963 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.1■□□□□ 0.65
RNF103-CHMP3A0A140T963 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
RNF103-CHMP3A0A140T963 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF103-CHMP3A0A140T963 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RNF103-CHMP3A0A140T963 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF103-CHMP3A0A140T963 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RNF103-CHMP3A0A140T963 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF103-CHMP3A0A140T963 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF103-CHMP3A0A140T963 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF103-CHMP3A0A140T963 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF103-CHMP3A0A140T963 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 AC097381.1-201ENST00000429019 1296 ntBASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 AC125437.2-201ENST00000625180 2167 ntBASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF103-CHMP3A0A140T963 KRT8P36-201ENST00000489121 1440 ntBASIC19.08■□□□□ 0.65
RNF103-CHMP3A0A140T963 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
RNF103-CHMP3A0A140T963 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF103-CHMP3A0A140T963 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF103-CHMP3A0A140T963 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.08■□□□□ 0.65
RNF103-CHMP3A0A140T963 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.08■□□□□ 0.65
RNF103-CHMP3A0A140T963 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.08■□□□□ 0.65
RNF103-CHMP3A0A140T963 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF103-CHMP3A0A140T963 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF103-CHMP3A0A140T963 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF103-CHMP3A0A140T963 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF103-CHMP3A0A140T963 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF103-CHMP3A0A140T963 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF103-CHMP3A0A140T963 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.08■□□□□ 0.64
RNF103-CHMP3A0A140T963 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF103-CHMP3A0A140T963 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF103-CHMP3A0A140T963 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF103-CHMP3A0A140T963 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF103-CHMP3A0A140T963 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms