Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-1A0A0A6YYK1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 AP001160.3-201ENST00000601484 763 ntBASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 FAM21FP-204ENST00000608637 956 ntBASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV8-1A0A0A6YYK1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 AC093503.3-201ENST00000624917 2352 ntBASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV8-1A0A0A6YYK1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
TRAV8-1A0A0A6YYK1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.08■□□□□ 0.01
TRAV8-1A0A0A6YYK1 Z82202.1-201ENST00000623446 1880 ntBASIC15.08■□□□□ 0.01
TRAV8-1A0A0A6YYK1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-1A0A0A6YYK1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TRAV8-1A0A0A6YYK1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-1A0A0A6YYK1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-1A0A0A6YYK1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC15.08■□□□□ 0
TRAV8-1A0A0A6YYK1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.08■□□□□ 0
TRAV8-1A0A0A6YYK1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-1A0A0A6YYK1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-1A0A0A6YYK1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-1A0A0A6YYK1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TRAV8-1A0A0A6YYK1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.08■□□□□ 0
TRAV8-1A0A0A6YYK1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-1A0A0A6YYK1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-1A0A0A6YYK1 AC105265.2-201ENST00000467189 838 ntBASIC15.08■□□□□ 0
TRAV8-1A0A0A6YYK1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC15.08■□□□□ 0
TRAV8-1A0A0A6YYK1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms