Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CASC19-228ENST00000641414 1684 ntBASIC5.2□□□□□ -1.58
VPS13CQ709C8 NRAP-204ENST00000369360 5535 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 CPT1A-201ENST00000265641 5232 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS13CQ709C8 NUDCD2-201ENST00000302764 8005 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS13CQ709C8 PLAGL2-201ENST00000246229 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS13CQ709C8 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 SIK2-201ENST00000304987 9678 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS13CQ709C8 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS13CQ709C8 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 CUBNP3-201ENST00000457461 1784 ntBASIC5.2□□□□□ -1.58
VPS13CQ709C8 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 TRIM60P16-201ENST00000444048 694 ntBASIC5.2□□□□□ -1.58
VPS13CQ709C8 RPSAP37-201ENST00000470913 821 ntBASIC5.2□□□□□ -1.58
VPS13CQ709C8 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 AC016144.1-201ENST00000548175 1087 ntBASIC5.2□□□□□ -1.58
VPS13CQ709C8 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 AP000864.1-201ENST00000609424 650 ntBASIC5.2□□□□□ -1.58
VPS13CQ709C8 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.2□□□□□ -1.58
VPS13CQ709C8 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 AF287957.1-201ENST00000607368 1595 ntBASIC5.2□□□□□ -1.58
VPS13CQ709C8 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS13CQ709C8 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS13CQ709C8 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS13CQ709C8 MIR375-201ENST00000362103 64 ntBASIC5.2□□□□□ -1.58
VPS13CQ709C8 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS13CQ709C8 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 AL132875.1-201ENST00000403623 949 ntBASIC5.2□□□□□ -1.58
VPS13CQ709C8 SPTLC1P2-201ENST00000407089 121 ntBASIC5.2□□□□□ -1.58
VPS13CQ709C8 AL590240.2-201ENST00000413370 894 ntBASIC5.2□□□□□ -1.58
VPS13CQ709C8 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 AL606490.1-201ENST00000452266 765 ntBASIC5.2□□□□□ -1.58
VPS13CQ709C8 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS13CQ709C8 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS13CQ709C8 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS13CQ709C8 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VPS13CQ709C8 TTC28-201ENST00000397906 11795 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS13CQ709C8 DZIP1-202ENST00000361156 7011 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS13CQ709C8 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VPS13CQ709C8 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.2□□□□□ -1.58
VPS13CQ709C8 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC5.2□□□□□ -1.58
VPS13CQ709C8 KIF1B-205ENST00000377093 7565 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VPS13CQ709C8 U3.43-201ENST00000410734 213 ntBASIC5.19□□□□□ -1.58
VPS13CQ709C8 AL663061.1-201ENST00000416625 580 ntBASIC5.19□□□□□ -1.58
VPS13CQ709C8 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 BX284632.1-201ENST00000478218 541 ntBASIC5.19□□□□□ -1.58
VPS13CQ709C8 RN7SL705P-201ENST00000481678 294 ntBASIC5.19□□□□□ -1.58
VPS13CQ709C8 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 AC092865.1-201ENST00000544395 1023 ntBASIC5.19□□□□□ -1.58
VPS13CQ709C8 GTF2IP6-201ENST00000583143 541 ntBASIC5.19□□□□□ -1.58
VPS13CQ709C8 AC022106.1-201ENST00000612834 766 ntBASIC5.19□□□□□ -1.58
VPS13CQ709C8 AL139407.1-201ENST00000613826 1175 ntBASIC5.19□□□□□ -1.58
VPS13CQ709C8 AF117829.2-201ENST00000619538 361 ntBASIC5.19□□□□□ -1.58
VPS13CQ709C8 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 SPATA13-206ENST00000424834 8603 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS13CQ709C8 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS13CQ709C8 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS13CQ709C8 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS13CQ709C8 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 CEP89-201ENST00000305768 5678 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS13CQ709C8 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VPS13CQ709C8 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VPS13CQ709C8 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VPS13CQ709C8 COL6A3-201ENST00000295550 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS13CQ709C8 CFAP61-203ENST00000377293 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS13CQ709C8 AL049697.3-201ENST00000406493 982 ntBASIC5.19□□□□□ -1.58
VPS13CQ709C8 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 AC027026.1-201ENST00000532323 742 ntBASIC5.19□□□□□ -1.58
VPS13CQ709C8 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 CASC19-222ENST00000641321 1173 ntBASIC5.19□□□□□ -1.58
VPS13CQ709C8 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 CLASP2-209ENST00000468888 6978 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VPS13CQ709C8 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 ETV3-202ENST00000368192 5254 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VPS13CQ709C8 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 AMOTL1-202ENST00000317829 8844 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VPS13CQ709C8 GIGYF2-204ENST00000409480 5976 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS13CQ709C8 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 155.4 ms