Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CDY2B-201ENST00000382867 1961 ntAPPRIS ALT1 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
FOXR1Q6PIV2 THAP12P7-201ENST00000520248 2290 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AC055716.2-201ENST00000552545 2441 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 PACRG-203ENST00000366889 1503 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 NBPF25P-201ENST00000606775 2019 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 CTAGE11P-201ENST00000451540 2353 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 ZNF680P1-201ENST00000436625 1469 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AMZ2-205ENST00000577866 1492 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 ADGRF2-201ENST00000296862 2127 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 CD44-205ENST00000352818 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 MIR421-201ENST00000365696 85 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 MT-TS1-201ENST00000387416 69 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 SYNE1-AS1-201ENST00000412161 553 ntTSL 2 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AL390856.1-201ENST00000412174 628 ntTSL 2 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 NPM1P11-201ENST00000417106 855 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 KRT223P-201ENST00000422957 519 ntTSL 2 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AC012519.1-201ENST00000424588 610 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AL353754.1-201ENST00000440219 340 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AC092641.1-201ENST00000440229 772 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 RPL24P8-201ENST00000446071 474 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 NECAP1P2-201ENST00000455668 727 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 UBDP1-202ENST00000457888 382 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 RN7SL74P-201ENST00000464966 299 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 ZBTB20-AS5-201ENST00000465249 622 ntTSL 3 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 RN7SL841P-201ENST00000470547 297 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AC092943.1-201ENST00000485389 878 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 PRDX4P1-201ENST00000507189 574 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AC098799.2-201ENST00000509466 868 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AC079140.3-201ENST00000511111 550 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AC091965.2-201ENST00000512324 613 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 SCARNA15.1-201ENST00000516384 125 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AC060765.1-202ENST00000518367 257 ntTSL 3 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AP002963.1-201ENST00000530590 184 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AC023905.1-203ENST00000560180 765 ntTSL 5 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AC074051.3-201ENST00000570238 358 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AC022001.1-201ENST00000605193 268 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AC091946.2-201ENST00000606105 291 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AL162574.1-201ENST00000615702 950 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AC012150.2-201ENST00000621300 544 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AC009120.7-201ENST00000623452 780 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AC130456.6-201ENST00000623745 765 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AC114786.2-201ENST00000510090 1426 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AC073429.2-201ENST00000569694 1444 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 CLCN3P1-202ENST00000609203 1944 ntTSL 2 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 STAU2-AS1-201ENST00000517604 2076 ntTSL 2 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 CPEB4-209ENST00000522336 1551 ntTSL 5 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 EEF1A1P33-201ENST00000554413 1362 ntBASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
FOXR1Q6PIV2 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC8.34□□□□□ -1.08
FOXR1Q6PIV2 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
FOXR1Q6PIV2 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC8.34□□□□□ -1.08
FOXR1Q6PIV2 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.08
FOXR1Q6PIV2 USP17L26-202ENST00000610514 1677 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.08
FOXR1Q6PIV2 USP17L20-202ENST00000613757 1677 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.08
FOXR1Q6PIV2 USP17L17-202ENST00000614762 1677 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.08
FOXR1Q6PIV2 USP17L13-202ENST00000616303 1677 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.08
FOXR1Q6PIV2 USP17L25-202ENST00000621472 1677 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.08
FOXR1Q6PIV2 USP17L22-202ENST00000622009 1677 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.08
FOXR1Q6PIV2 USP17L24-202ENST00000622713 1677 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.08
FOXR1Q6PIV2 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 EIF3EP1-201ENST00000433978 1316 ntBASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
FOXR1Q6PIV2 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms