Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 MIR3154-201ENST00000577829 84 ntBASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 GLYATL1P2-202ENST00000588046 902 ntBASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 DYNLL1P1-201ENST00000595442 269 ntBASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 MIR6071-201ENST00000616741 78 ntBASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 AL596275.2-203ENST00000641951 371 ntBASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 TMEM75-201ENST00000624314 2165 ntBASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 AC093278.2-201ENST00000564956 2485 ntBASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
SHROOM1Q2M3G4 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 CTSLP6-201ENST00000458273 1002 ntBASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 RPL12P24-201ENST00000474907 486 ntBASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 H3F3AP5-201ENST00000475267 429 ntBASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 AC117500.1-201ENST00000497352 755 ntBASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 GTF2IP6-201ENST00000583143 541 ntBASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 AL359742.1-201ENST00000622497 540 ntBASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 AL122023.1-201ENST00000622847 530 ntBASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 AC073593.1-201ENST00000624500 411 ntBASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 TEX41-255ENST00000626404 610 ntTSL 5 BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 AC079949.2-201ENST00000617117 2933 ntBASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 OR52B5P-204ENST00000641744 3467 ntBASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 AC104837.1-201ENST00000444644 1587 ntBASIC7.84□□□□□ -1.15
SHROOM1Q2M3G4 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.16
SHROOM1Q2M3G4 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.84□□□□□ -1.16
SHROOM1Q2M3G4 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
SHROOM1Q2M3G4 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 AC018645.1-201ENST00000505003 109 ntBASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 AC016144.1-201ENST00000548175 1087 ntBASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 AC092718.4-201ENST00000566639 716 ntBASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 MIR4271-201ENST00000582451 67 ntBASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 AC034229.6-201ENST00000623704 224 ntBASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 SNX18P10-201ENST00000625014 519 ntBASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 AC138915.4-201ENST00000565549 4147 ntBASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 AL034417.4-202ENST00000642135 2236 ntBASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
SHROOM1Q2M3G4 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms