Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC5.6□□□□□ -1.51
CX3CL1P78423 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.6□□□□□ -1.51
CX3CL1P78423 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC5.6□□□□□ -1.51
CX3CL1P78423 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.6□□□□□ -1.51
CX3CL1P78423 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC5.6□□□□□ -1.51
CX3CL1P78423 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CX3CL1P78423 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CX3CL1P78423 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CX3CL1P78423 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
CX3CL1P78423 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC5.59□□□□□ -1.51
CX3CL1P78423 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CX3CL1P78423 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CX3CL1P78423 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CX3CL1P78423 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CX3CL1P78423 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC5.59□□□□□ -1.51
CX3CL1P78423 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.59□□□□□ -1.51
CX3CL1P78423 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CX3CL1P78423 Y_RNA.62-201ENST00000362840 99 ntBASIC5.59□□□□□ -1.51
CX3CL1P78423 RN7SKP55-201ENST00000364888 307 ntBASIC5.59□□□□□ -1.51
CX3CL1P78423 RNA5SP172-201ENST00000365061 118 ntBASIC5.59□□□□□ -1.51
CX3CL1P78423 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CX3CL1P78423 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC5.59□□□□□ -1.51
CX3CL1P78423 AL136116.2-201ENST00000404020 785 ntBASIC5.59□□□□□ -1.51
CX3CL1P78423 RN7SKP30-201ENST00000411373 334 ntBASIC5.59□□□□□ -1.51
CX3CL1P78423 RPS21P8-201ENST00000413365 247 ntBASIC5.59□□□□□ -1.51
CX3CL1P78423 NRIR-202ENST00000414795 506 ntTSL 3 BASIC5.59□□□□□ -1.51
CX3CL1P78423 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CX3CL1P78423 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC5.59□□□□□ -1.51
CX3CL1P78423 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC5.59□□□□□ -1.51
CX3CL1P78423 ZBTB8OSP2-201ENST00000423890 504 ntBASIC5.59□□□□□ -1.51
CX3CL1P78423 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.59□□□□□ -1.51
CX3CL1P78423 FTLP17-201ENST00000432567 525 ntBASIC5.59□□□□□ -1.51
CX3CL1P78423 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.59□□□□□ -1.51
CX3CL1P78423 OR51P1P-201ENST00000447547 942 ntBASIC5.59□□□□□ -1.51
CX3CL1P78423 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC5.59□□□□□ -1.51
CX3CL1P78423 AL929410.2-201ENST00000451170 189 ntBASIC5.59□□□□□ -1.51
CX3CL1P78423 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC5.59□□□□□ -1.51
CX3CL1P78423 RPS14P8-201ENST00000478778 369 ntBASIC5.59□□□□□ -1.51
CX3CL1P78423 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.59□□□□□ -1.51
CX3CL1P78423 AC010409.2-201ENST00000505780 478 ntBASIC5.59□□□□□ -1.51
CX3CL1P78423 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.59□□□□□ -1.51
CX3CL1P78423 HNRNPCP8-201ENST00000528764 888 ntBASIC5.59□□□□□ -1.51
CX3CL1P78423 OR5M6P-201ENST00000530227 937 ntBASIC5.59□□□□□ -1.51
CX3CL1P78423 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC5.59□□□□□ -1.51
CX3CL1P78423 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.59□□□□□ -1.51
CX3CL1P78423 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.59□□□□□ -1.51
CX3CL1P78423 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC5.59□□□□□ -1.51
CX3CL1P78423 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CX3CL1P78423 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.59□□□□□ -1.51
CX3CL1P78423 AC005229.3-201ENST00000603438 323 ntBASIC5.59□□□□□ -1.51
CX3CL1P78423 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.59□□□□□ -1.51
CX3CL1P78423 AL354696.1-201ENST00000614652 497 ntBASIC5.59□□□□□ -1.51
CX3CL1P78423 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.59□□□□□ -1.51
CX3CL1P78423 AC104820.1-201ENST00000624183 307 ntBASIC5.59□□□□□ -1.51
CX3CL1P78423 AC073857.1-201ENST00000625082 1054 ntBASIC5.59□□□□□ -1.51
CX3CL1P78423 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC5.59□□□□□ -1.51
CX3CL1P78423 AL356585.10-201ENST00000641883 123 ntBASIC5.59□□□□□ -1.51
CX3CL1P78423 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.59□□□□□ -1.51
CX3CL1P78423 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CX3CL1P78423 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC5.59□□□□□ -1.51
CX3CL1P78423 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC5.59□□□□□ -1.51
CX3CL1P78423 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CX3CL1P78423 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CX3CL1P78423 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CX3CL1P78423 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CX3CL1P78423 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.59□□□□□ -1.51
CX3CL1P78423 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CX3CL1P78423 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CX3CL1P78423 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.59□□□□□ -1.52
CX3CL1P78423 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.59□□□□□ -1.52
CX3CL1P78423 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CX3CL1P78423 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CX3CL1P78423 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CX3CL1P78423 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CX3CL1P78423 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC5.58□□□□□ -1.52
CX3CL1P78423 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CX3CL1P78423 SFTPD-AS1-201ENST00000608229 5001 ntBASIC5.58□□□□□ -1.52
CX3CL1P78423 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CX3CL1P78423 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CX3CL1P78423 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CX3CL1P78423 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.58□□□□□ -1.52
CX3CL1P78423 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CX3CL1P78423 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC5.58□□□□□ -1.52
CX3CL1P78423 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CX3CL1P78423 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC5.58□□□□□ -1.52
CX3CL1P78423 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CX3CL1P78423 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC5.58□□□□□ -1.52
CX3CL1P78423 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CX3CL1P78423 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CX3CL1P78423 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CX3CL1P78423 U3.48-201ENST00000363172 216 ntBASIC5.58□□□□□ -1.52
CX3CL1P78423 HNRNPH1P2-201ENST00000396845 1210 ntBASIC5.58□□□□□ -1.52
CX3CL1P78423 ERMN-202ENST00000409216 746 ntTSL 4 BASIC5.58□□□□□ -1.52
CX3CL1P78423 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms