Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC016559.1-201ENST00000511420 199 ntBASIC7.48□□□□□ -1.21
TPM4P67936 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.48□□□□□ -1.21
TPM4P67936 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.48□□□□□ -1.21
TPM4P67936 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC7.48□□□□□ -1.21
TPM4P67936 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC7.48□□□□□ -1.21
TPM4P67936 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.48□□□□□ -1.21
TPM4P67936 MIR3689C-201ENST00000581239 72 ntBASIC7.48□□□□□ -1.21
TPM4P67936 CARSP1-201ENST00000603171 889 ntBASIC7.48□□□□□ -1.21
TPM4P67936 AL161420.1-201ENST00000619393 264 ntBASIC7.48□□□□□ -1.21
TPM4P67936 AC005332.9-201ENST00000620266 2921 ntBASIC7.48□□□□□ -1.21
TPM4P67936 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC7.48□□□□□ -1.21
TPM4P67936 DLEU2L-201ENST00000371086 3555 ntBASIC7.48□□□□□ -1.21
TPM4P67936 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TPM4P67936 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TPM4P67936 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TPM4P67936 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TPM4P67936 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
TPM4P67936 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TPM4P67936 AC102941.1-201ENST00000567616 1537 ntBASIC7.47□□□□□ -1.21
TPM4P67936 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.47□□□□□ -1.21
TPM4P67936 AC090774.4-201ENST00000578888 1372 ntBASIC7.47□□□□□ -1.21
TPM4P67936 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
TPM4P67936 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TPM4P67936 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
TPM4P67936 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
TPM4P67936 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC7.47□□□□□ -1.21
TPM4P67936 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TPM4P67936 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TPM4P67936 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.47□□□□□ -1.21
TPM4P67936 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TPM4P67936 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC7.47□□□□□ -1.21
TPM4P67936 RNA5SP514-201ENST00000363717 111 ntBASIC7.47□□□□□ -1.21
TPM4P67936 SNORA70.5-201ENST00000365519 135 ntBASIC7.47□□□□□ -1.21
TPM4P67936 PCNAP3-201ENST00000397222 778 ntBASIC7.47□□□□□ -1.21
TPM4P67936 OR7E91P-201ENST00000400027 866 ntBASIC7.47□□□□□ -1.21
TPM4P67936 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC7.47□□□□□ -1.21
TPM4P67936 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TPM4P67936 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.47□□□□□ -1.21
TPM4P67936 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC7.47□□□□□ -1.21
TPM4P67936 AC007568.1-201ENST00000422912 471 ntBASIC7.47□□□□□ -1.21
TPM4P67936 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC7.47□□□□□ -1.21
TPM4P67936 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.47□□□□□ -1.21
TPM4P67936 AC007365.2-201ENST00000428806 458 ntBASIC7.47□□□□□ -1.21
TPM4P67936 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.47□□□□□ -1.21
TPM4P67936 AC018804.1-201ENST00000430381 618 ntBASIC7.47□□□□□ -1.21
TPM4P67936 AC090954.1-201ENST00000445502 361 ntBASIC7.47□□□□□ -1.21
TPM4P67936 MEF2AP1-201ENST00000454867 863 ntBASIC7.47□□□□□ -1.21
TPM4P67936 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC7.47□□□□□ -1.21
TPM4P67936 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TPM4P67936 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.47□□□□□ -1.21
TPM4P67936 AC246817.2-201ENST00000523971 577 ntTSL 5 BASIC7.47□□□□□ -1.21
TPM4P67936 OR7E1P-201ENST00000533891 958 ntBASIC7.47□□□□□ -1.21
TPM4P67936 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC7.47□□□□□ -1.21
TPM4P67936 HIGD1AP9-201ENST00000550710 279 ntBASIC7.47□□□□□ -1.21
TPM4P67936 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC7.47□□□□□ -1.21
TPM4P67936 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TPM4P67936 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC7.47□□□□□ -1.21
TPM4P67936 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC7.47□□□□□ -1.21
TPM4P67936 AL136139.1-201ENST00000605568 222 ntBASIC7.47□□□□□ -1.21
TPM4P67936 MIR7848-201ENST00000617402 101 ntBASIC7.47□□□□□ -1.21
TPM4P67936 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.47□□□□□ -1.21
TPM4P67936 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
TPM4P67936 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.47□□□□□ -1.21
TPM4P67936 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC7.47□□□□□ -1.21
TPM4P67936 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.47□□□□□ -1.21
TPM4P67936 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC7.47□□□□□ -1.21
TPM4P67936 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TPM4P67936 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TPM4P67936 CASC19-228ENST00000641414 1684 ntBASIC7.47□□□□□ -1.21
TPM4P67936 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.47□□□□□ -1.21
TPM4P67936 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
TPM4P67936 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
TPM4P67936 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
TPM4P67936 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC7.46□□□□□ -1.21
TPM4P67936 AL591135.1-201ENST00000401578 5914 ntBASIC7.46□□□□□ -1.21
TPM4P67936 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
TPM4P67936 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC7.46□□□□□ -1.21
TPM4P67936 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.46□□□□□ -1.22
TPM4P67936 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.46□□□□□ -1.22
TPM4P67936 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.46□□□□□ -1.22
TPM4P67936 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
TPM4P67936 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
TPM4P67936 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC7.46□□□□□ -1.22
TPM4P67936 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC7.46□□□□□ -1.22
TPM4P67936 AL050335.1-201ENST00000396909 869 ntBASIC7.46□□□□□ -1.22
TPM4P67936 GAPDHP57-201ENST00000424400 585 ntBASIC7.46□□□□□ -1.22
TPM4P67936 Z68868.1-201ENST00000429048 544 ntBASIC7.46□□□□□ -1.22
TPM4P67936 PAICSP2-201ENST00000429118 1150 ntBASIC7.46□□□□□ -1.22
TPM4P67936 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC7.46□□□□□ -1.22
TPM4P67936 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC7.46□□□□□ -1.22
TPM4P67936 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.46□□□□□ -1.22
TPM4P67936 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
TPM4P67936 AC128716.1-201ENST00000475129 166 ntBASIC7.46□□□□□ -1.22
TPM4P67936 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
TPM4P67936 AC117383.2-201ENST00000514722 322 ntBASIC7.46□□□□□ -1.22
TPM4P67936 AP001803.1-201ENST00000525668 147 ntBASIC7.46□□□□□ -1.22
TPM4P67936 AP005639.1-201ENST00000526939 192 ntBASIC7.46□□□□□ -1.22
TPM4P67936 OR4A6P-201ENST00000534364 970 ntBASIC7.46□□□□□ -1.22
TPM4P67936 AC084033.2-201ENST00000551532 967 ntBASIC7.46□□□□□ -1.22
TPM4P67936 AL157871.5-201ENST00000555212 533 ntTSL 2 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms