Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 RPL29P7-201ENST00000440227 457 ntBASIC6.06□□□□□ -1.44
SEC61A1P61619 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.06□□□□□ -1.44
SEC61A1P61619 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.06□□□□□ -1.44
SEC61A1P61619 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.06□□□□□ -1.44
SEC61A1P61619 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC6.06□□□□□ -1.44
SEC61A1P61619 OR7L1P-201ENST00000456181 380 ntBASIC6.06□□□□□ -1.44
SEC61A1P61619 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SEC61A1P61619 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.06□□□□□ -1.44
SEC61A1P61619 MTND2P39-201ENST00000457230 764 ntBASIC6.06□□□□□ -1.44
SEC61A1P61619 AC117395.2-201ENST00000463122 1128 ntBASIC6.06□□□□□ -1.44
SEC61A1P61619 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.06□□□□□ -1.44
SEC61A1P61619 ABCA11P-202ENST00000504019 2110 ntBASIC6.06□□□□□ -1.44
SEC61A1P61619 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.06□□□□□ -1.44
SEC61A1P61619 AK6-204ENST00000512561 587 ntTSL 5 BASIC6.06□□□□□ -1.44
SEC61A1P61619 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.06□□□□□ -1.44
SEC61A1P61619 RNA5SP96-201ENST00000516041 107 ntBASIC6.06□□□□□ -1.44
SEC61A1P61619 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A1P61619 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.06□□□□□ -1.44
SEC61A1P61619 AC078878.1-201ENST00000539832 958 ntBASIC6.06□□□□□ -1.44
SEC61A1P61619 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.06□□□□□ -1.44
SEC61A1P61619 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.06□□□□□ -1.44
SEC61A1P61619 EIF1AXP2-201ENST00000555940 413 ntBASIC6.06□□□□□ -1.44
SEC61A1P61619 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A1P61619 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A1P61619 RN7SL131P-201ENST00000579043 256 ntBASIC6.06□□□□□ -1.44
SEC61A1P61619 RN7SL42P-201ENST00000579786 294 ntBASIC6.06□□□□□ -1.44
SEC61A1P61619 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC6.06□□□□□ -1.44
SEC61A1P61619 GTF2IP6-201ENST00000583143 541 ntBASIC6.06□□□□□ -1.44
SEC61A1P61619 AL512430.4-201ENST00000603085 613 ntBASIC6.06□□□□□ -1.44
SEC61A1P61619 AC137695.2-201ENST00000603123 754 ntBASIC6.06□□□□□ -1.44
SEC61A1P61619 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC6.06□□□□□ -1.44
SEC61A1P61619 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A1P61619 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A1P61619 AC016911.1-201ENST00000613297 452 ntBASIC6.06□□□□□ -1.44
SEC61A1P61619 AC078909.2-201ENST00000620584 398 ntBASIC6.06□□□□□ -1.44
SEC61A1P61619 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC6.06□□□□□ -1.44
SEC61A1P61619 AC211433.3-201ENST00000623770 375 ntBASIC6.06□□□□□ -1.44
SEC61A1P61619 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.06□□□□□ -1.44
SEC61A1P61619 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.06□□□□□ -1.44
SEC61A1P61619 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.06□□□□□ -1.44
SEC61A1P61619 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A1P61619 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A1P61619 MKI67P1-201ENST00000604297 1460 ntBASIC6.06□□□□□ -1.44
SEC61A1P61619 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SEC61A1P61619 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.06□□□□□ -1.44
SEC61A1P61619 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A1P61619 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A1P61619 AC061975.5-201ENST00000584928 1441 ntBASIC6.06□□□□□ -1.44
SEC61A1P61619 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A1P61619 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A1P61619 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A1P61619 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A1P61619 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.06□□□□□ -1.44
SEC61A1P61619 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A1P61619 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SEC61A1P61619 TMCC1P1-201ENST00000518897 1980 ntBASIC6.06□□□□□ -1.44
SEC61A1P61619 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.06□□□□□ -1.44
SEC61A1P61619 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SEC61A1P61619 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
SEC61A1P61619 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC6.05□□□□□ -1.44
SEC61A1P61619 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC6.05□□□□□ -1.44
SEC61A1P61619 AC022905.1-201ENST00000503430 3048 ntBASIC6.05□□□□□ -1.44
SEC61A1P61619 OLMALINC-203ENST00000641087 3779 ntBASIC6.05□□□□□ -1.44
SEC61A1P61619 DDX10P2-201ENST00000417796 2614 ntBASIC6.05□□□□□ -1.44
SEC61A1P61619 AC105114.1-201ENST00000624795 1862 ntBASIC6.05□□□□□ -1.44
SEC61A1P61619 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SEC61A1P61619 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.05□□□□□ -1.44
SEC61A1P61619 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SEC61A1P61619 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.05□□□□□ -1.44
SEC61A1P61619 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SEC61A1P61619 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
SEC61A1P61619 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
SEC61A1P61619 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
SEC61A1P61619 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.05□□□□□ -1.44
SEC61A1P61619 MEAF6P1-201ENST00000416092 327 ntBASIC6.05□□□□□ -1.44
SEC61A1P61619 AL161742.1-201ENST00000418154 584 ntBASIC6.05□□□□□ -1.44
SEC61A1P61619 AC134879.1-201ENST00000426062 394 ntBASIC6.05□□□□□ -1.44
SEC61A1P61619 EIF2S2P3-201ENST00000428356 999 ntBASIC6.05□□□□□ -1.44
SEC61A1P61619 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC6.05□□□□□ -1.44
SEC61A1P61619 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SEC61A1P61619 SDR42E1P3-201ENST00000438345 502 ntBASIC6.05□□□□□ -1.44
SEC61A1P61619 PMS2P11-201ENST00000451831 574 ntBASIC6.05□□□□□ -1.44
SEC61A1P61619 TAAR4P-201ENST00000454843 1039 ntBASIC6.05□□□□□ -1.44
SEC61A1P61619 AC139272.1-201ENST00000505516 640 ntBASIC6.05□□□□□ -1.44
SEC61A1P61619 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SEC61A1P61619 SUMO2P19-201ENST00000518920 295 ntBASIC6.05□□□□□ -1.44
SEC61A1P61619 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.05□□□□□ -1.44
SEC61A1P61619 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC6.05□□□□□ -1.44
SEC61A1P61619 GLYATL1P4-201ENST00000529326 906 ntBASIC6.05□□□□□ -1.44
SEC61A1P61619 AC126177.6-201ENST00000550420 1009 ntBASIC6.05□□□□□ -1.44
SEC61A1P61619 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.05□□□□□ -1.44
SEC61A1P61619 NDUFA3P4-201ENST00000560814 250 ntBASIC6.05□□□□□ -1.44
SEC61A1P61619 RPL21P136-201ENST00000605378 396 ntBASIC6.05□□□□□ -1.44
SEC61A1P61619 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC6.05□□□□□ -1.44
SEC61A1P61619 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.05□□□□□ -1.44
SEC61A1P61619 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.05□□□□□ -1.44
SEC61A1P61619 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.05□□□□□ -1.44
SEC61A1P61619 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.05□□□□□ -1.44
SEC61A1P61619 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.05□□□□□ -1.44
SEC61A1P61619 AP003486.1-201ENST00000525716 3994 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms