Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC4.79□□□□□ -1.64
CKS1BP61024 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC4.79□□□□□ -1.64
CKS1BP61024 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC4.79□□□□□ -1.64
CKS1BP61024 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC4.79□□□□□ -1.64
CKS1BP61024 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CKS1BP61024 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CKS1BP61024 SELE-204ENST00000367776 3576 ntTSL 5 BASIC4.79□□□□□ -1.64
CKS1BP61024 SELE-205ENST00000367777 3576 ntTSL 5 BASIC4.79□□□□□ -1.64
CKS1BP61024 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.79□□□□□ -1.64
CKS1BP61024 BCORP1-203ENST00000513194 5093 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CKS1BP61024 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CKS1BP61024 AL391380.1-201ENST00000439300 1432 ntBASIC4.79□□□□□ -1.64
CKS1BP61024 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.79□□□□□ -1.64
CKS1BP61024 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.79□□□□□ -1.64
CKS1BP61024 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CKS1BP61024 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC4.78□□□□□ -1.64
CKS1BP61024 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CKS1BP61024 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CKS1BP61024 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.78□□□□□ -1.64
CKS1BP61024 AC006511.3-201ENST00000624929 1783 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
CKS1BP61024 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.78□□□□□ -1.64
CKS1BP61024 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CKS1BP61024 VEZF1P1-201ENST00000423931 1541 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CKS1BP61024 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CKS1BP61024 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CKS1BP61024 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CKS1BP61024 GPR15-201ENST00000284311 1252 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CKS1BP61024 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CKS1BP61024 AC006511.2-201ENST00000388966 660 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CKS1BP61024 HMGB3P1-201ENST00000393368 573 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CKS1BP61024 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
CKS1BP61024 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CKS1BP61024 APCDD1L-AS1-204ENST00000427794 461 ntTSL 3 BASIC4.78□□□□□ -1.64
CKS1BP61024 AC073900.1-201ENST00000429766 776 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 AC245047.6-201ENST00000445444 617 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 OR7E102P-201ENST00000448855 1015 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.78□□□□□ -1.64
CKS1BP61024 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC4.78□□□□□ -1.64
CKS1BP61024 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC4.78□□□□□ -1.64
CKS1BP61024 AC114300.1-201ENST00000502347 280 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC4.78□□□□□ -1.64
CKS1BP61024 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC4.78□□□□□ -1.64
CKS1BP61024 OR7E83P-201ENST00000511021 970 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 AC209005.1-201ENST00000514043 464 ntTSL 3 BASIC4.78□□□□□ -1.64
CKS1BP61024 IGHVIII-26-1-201ENST00000520387 250 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC4.78□□□□□ -1.64
CKS1BP61024 LINC01591-202ENST00000522279 1240 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CKS1BP61024 CCNC-215ENST00000523799 1035 ntTSL 3 BASIC4.78□□□□□ -1.64
CKS1BP61024 OR7E154P-201ENST00000525174 932 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 OR7E2P-201ENST00000533071 889 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC4.78□□□□□ -1.64
CKS1BP61024 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC4.78□□□□□ -1.64
CKS1BP61024 AP000619.1-201ENST00000540293 1000 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 SOX5-213ENST00000541847 758 ntTSL 3 BASIC4.78□□□□□ -1.64
CKS1BP61024 AC243972.1-201ENST00000542992 570 ntTSL 4 BASIC4.78□□□□□ -1.64
CKS1BP61024 AC073896.5-201ENST00000546464 542 ntTSL 5 BASIC4.78□□□□□ -1.64
CKS1BP61024 MYL2-203ENST00000548438 664 ntTSL 3 BASIC4.78□□□□□ -1.64
CKS1BP61024 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC4.78□□□□□ -1.64
CKS1BP61024 SRMP2-201ENST00000553832 916 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC4.78□□□□□ -1.64
CKS1BP61024 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC4.78□□□□□ -1.64
CKS1BP61024 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC4.78□□□□□ -1.64
CKS1BP61024 AC019322.1-201ENST00000571869 389 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 ZNF174-205ENST00000575752 1068 ntTSL 5 BASIC4.78□□□□□ -1.64
CKS1BP61024 RN7SL835P-201ENST00000579920 262 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 AC005410.2-201ENST00000580270 463 ntTSL 3 BASIC4.78□□□□□ -1.64
CKS1BP61024 APOC2-204ENST00000591597 447 ntTSL 5 BASIC4.78□□□□□ -1.64
CKS1BP61024 AC010615.2-205ENST00000599993 929 ntTSL 2 BASIC4.78□□□□□ -1.64
CKS1BP61024 AC137695.2-201ENST00000603123 754 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 AC004852.1-201ENST00000605206 154 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 AL136141.1-201ENST00000605780 369 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 AC104184.1-201ENST00000607513 721 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 RN7SL3-201ENST00000610674 299 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC4.78□□□□□ -1.64
CKS1BP61024 RNA5SP439-201ENST00000617595 124 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 AC005790.1-201ENST00000619774 450 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 AL353898.2-201ENST00000623000 255 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC4.78□□□□□ -1.64
CKS1BP61024 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC4.78□□□□□ -1.64
CKS1BP61024 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CKS1BP61024 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CKS1BP61024 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CKS1BP61024 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CKS1BP61024 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CKS1BP61024 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CKS1BP61024 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CKS1BP61024 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CKS1BP61024 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.78□□□□□ -1.64
CKS1BP61024 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CKS1BP61024 AL031595.2-201ENST00000624215 19071 ntBASIC4.78□□□□□ -1.64
CKS1BP61024 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC4.78□□□□□ -1.64
CKS1BP61024 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CKS1BP61024 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CKS1BP61024 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms