Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 OR4A13P-201ENST00000529316 942 ntBASIC11.6□□□□□ -0.55
SMARCA4P51532 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SMARCA4P51532 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC11.6□□□□□ -0.55
SMARCA4P51532 AC010333.3-201ENST00000615100 402 ntBASIC11.6□□□□□ -0.55
SMARCA4P51532 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMARCA4P51532 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMARCA4P51532 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMARCA4P51532 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMARCA4P51532 AL035530.2-201ENST00000607391 1675 ntTSL 3 BASIC11.59□□□□□ -0.55
SMARCA4P51532 SPTBN1-201ENST00000333896 9075 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMARCA4P51532 DDHD1-203ENST00000395606 12769 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
SMARCA4P51532 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
SMARCA4P51532 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMARCA4P51532 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMARCA4P51532 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC11.59□□□□□ -0.55
SMARCA4P51532 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC11.59□□□□□ -0.55
SMARCA4P51532 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
SMARCA4P51532 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC11.59□□□□□ -0.55
SMARCA4P51532 Z68868.1-201ENST00000429048 544 ntBASIC11.59□□□□□ -0.55
SMARCA4P51532 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC11.59□□□□□ -0.55
SMARCA4P51532 KRTAP8-2P-201ENST00000440620 186 ntBASIC11.59□□□□□ -0.55
SMARCA4P51532 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC11.59□□□□□ -0.55
SMARCA4P51532 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC11.59□□□□□ -0.55
SMARCA4P51532 AC098847.1-201ENST00000473094 348 ntBASIC11.59□□□□□ -0.55
SMARCA4P51532 RN7SL717P-201ENST00000478343 297 ntBASIC11.59□□□□□ -0.55
SMARCA4P51532 AC026826.1-201ENST00000493002 361 ntBASIC11.59□□□□□ -0.55
SMARCA4P51532 AC008638.1-201ENST00000506035 866 ntBASIC11.59□□□□□ -0.55
SMARCA4P51532 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC11.59□□□□□ -0.55
SMARCA4P51532 OR9L1P-201ENST00000529493 933 ntBASIC11.59□□□□□ -0.55
SMARCA4P51532 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC11.59□□□□□ -0.55
SMARCA4P51532 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC11.59□□□□□ -0.55
SMARCA4P51532 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC11.59□□□□□ -0.55
SMARCA4P51532 MRPL57P1-201ENST00000621486 265 ntBASIC11.59□□□□□ -0.55
SMARCA4P51532 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SMARCA4P51532 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC11.59□□□□□ -0.55
SMARCA4P51532 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC11.59□□□□□ -0.55
SMARCA4P51532 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMARCA4P51532 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMARCA4P51532 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC11.59□□□□□ -0.55
SMARCA4P51532 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMARCA4P51532 ADAMTS4-202ENST00000367996 9773 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SMARCA4P51532 AC011455.2-201ENST00000599320 3336 ntBASIC11.58□□□□□ -0.56
SMARCA4P51532 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SMARCA4P51532 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMARCA4P51532 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SMARCA4P51532 MTCO1P25-201ENST00000414449 1799 ntBASIC11.58□□□□□ -0.56
SMARCA4P51532 EIF3EP1-201ENST00000433978 1316 ntBASIC11.58□□□□□ -0.56
SMARCA4P51532 FRMPD4-202ENST00000616992 7916 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
SMARCA4P51532 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
SMARCA4P51532 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC11.58□□□□□ -0.56
SMARCA4P51532 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC11.58□□□□□ -0.56
SMARCA4P51532 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC11.58□□□□□ -0.56
SMARCA4P51532 CFL1P4-201ENST00000451536 498 ntBASIC11.58□□□□□ -0.56
SMARCA4P51532 RN7SL193P-201ENST00000491708 276 ntBASIC11.58□□□□□ -0.56
SMARCA4P51532 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
SMARCA4P51532 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC11.58□□□□□ -0.56
SMARCA4P51532 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SMARCA4P51532 ADGRE2-201ENST00000315576 6767 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMARCA4P51532 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SMARCA4P51532 CELF2-204ENST00000417956 8044 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMARCA4P51532 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMARCA4P51532 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC11.58□□□□□ -0.56
SMARCA4P51532 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC11.58□□□□□ -0.56
SMARCA4P51532 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMARCA4P51532 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMARCA4P51532 MYO5B-201ENST00000285039 9505 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SMARCA4P51532 MON2-214ENST00000641654 10382 ntBASIC11.58□□□□□ -0.56
SMARCA4P51532 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SMARCA4P51532 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC11.57□□□□□ -0.56
SMARCA4P51532 OR7E122P-202ENST00000641144 6171 ntBASIC11.57□□□□□ -0.56
SMARCA4P51532 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SMARCA4P51532 MIR199B-201ENST00000384849 110 ntBASIC11.57□□□□□ -0.56
SMARCA4P51532 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC11.57□□□□□ -0.56
SMARCA4P51532 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC11.57□□□□□ -0.56
SMARCA4P51532 UCK2-205ENST00000469256 753 ntTSL 3 BASIC11.57□□□□□ -0.56
SMARCA4P51532 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC11.57□□□□□ -0.56
SMARCA4P51532 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC11.57□□□□□ -0.56
SMARCA4P51532 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC11.57□□□□□ -0.56
SMARCA4P51532 AL513218.1-201ENST00000606527 391 ntBASIC11.57□□□□□ -0.56
SMARCA4P51532 AC127024.6-201ENST00000621598 424 ntBASIC11.57□□□□□ -0.56
SMARCA4P51532 SVIL-201ENST00000355867 7586 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMARCA4P51532 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
SMARCA4P51532 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
SMARCA4P51532 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC11.57□□□□□ -0.56
SMARCA4P51532 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC11.57□□□□□ -0.56
SMARCA4P51532 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMARCA4P51532 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC11.57□□□□□ -0.56
SMARCA4P51532 RASSF6-201ENST00000307439 5994 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMARCA4P51532 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
SMARCA4P51532 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SMARCA4P51532 CR788268.1-201ENST00000603931 1809 ntBASIC11.57□□□□□ -0.56
SMARCA4P51532 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SMARCA4P51532 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMARCA4P51532 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SMARCA4P51532 MIR323A-201ENST00000362199 86 ntBASIC11.57□□□□□ -0.56
SMARCA4P51532 CYCSP52-201ENST00000422857 310 ntBASIC11.57□□□□□ -0.56
SMARCA4P51532 RPS7P14-201ENST00000426405 583 ntBASIC11.57□□□□□ -0.56
SMARCA4P51532 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC11.57□□□□□ -0.56
SMARCA4P51532 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC11.57□□□□□ -0.56
SMARCA4P51532 TPRX1P1-201ENST00000557620 319 ntBASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms