Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.02□□□□□ -1.29
SLC1A1P43005 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SLC1A1P43005 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
SLC1A1P43005 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.02□□□□□ -1.29
SLC1A1P43005 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.02□□□□□ -1.29
SLC1A1P43005 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
SLC1A1P43005 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SLC1A1P43005 RN7SKP296-201ENST00000411185 341 ntBASIC7.02□□□□□ -1.29
SLC1A1P43005 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC7.02□□□□□ -1.29
SLC1A1P43005 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SLC1A1P43005 RPS7P12-201ENST00000422385 582 ntBASIC7.02□□□□□ -1.29
SLC1A1P43005 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC7.02□□□□□ -1.29
SLC1A1P43005 AC009362.1-201ENST00000427253 406 ntBASIC7.02□□□□□ -1.29
SLC1A1P43005 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.02□□□□□ -1.29
SLC1A1P43005 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.02□□□□□ -1.29
SLC1A1P43005 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
SLC1A1P43005 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC7.02□□□□□ -1.29
SLC1A1P43005 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.02□□□□□ -1.29
SLC1A1P43005 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC7.02□□□□□ -1.29
SLC1A1P43005 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC7.02□□□□□ -1.29
SLC1A1P43005 TUBBP11-201ENST00000472255 252 ntBASIC7.02□□□□□ -1.29
SLC1A1P43005 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC7.02□□□□□ -1.29
SLC1A1P43005 AC140063.1-201ENST00000541343 259 ntBASIC7.02□□□□□ -1.29
SLC1A1P43005 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SLC1A1P43005 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.02□□□□□ -1.29
SLC1A1P43005 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC7.02□□□□□ -1.29
SLC1A1P43005 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.02□□□□□ -1.29
SLC1A1P43005 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC7.02□□□□□ -1.29
SLC1A1P43005 MIR4428-201ENST00000584884 73 ntBASIC7.02□□□□□ -1.29
SLC1A1P43005 AC074141.1-201ENST00000588129 2995 ntBASIC7.02□□□□□ -1.29
SLC1A1P43005 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.02□□□□□ -1.29
SLC1A1P43005 AC025171.4-201ENST00000607250 1047 ntBASIC7.02□□□□□ -1.29
SLC1A1P43005 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC7.02□□□□□ -1.29
SLC1A1P43005 AC005753.1-201ENST00000623837 618 ntBASIC7.02□□□□□ -1.29
SLC1A1P43005 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.02□□□□□ -1.29
SLC1A1P43005 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SLC1A1P43005 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
SLC1A1P43005 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
SLC1A1P43005 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
SLC1A1P43005 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
SLC1A1P43005 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
SLC1A1P43005 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
SLC1A1P43005 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.02□□□□□ -1.29
SLC1A1P43005 ZNF658B-201ENST00000602828 3408 ntBASIC7.02□□□□□ -1.29
SLC1A1P43005 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
SLC1A1P43005 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
SLC1A1P43005 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
SLC1A1P43005 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC7.02□□□□□ -1.29
SLC1A1P43005 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
SLC1A1P43005 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SLC1A1P43005 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
SLC1A1P43005 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
SLC1A1P43005 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SLC1A1P43005 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
SLC1A1P43005 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.01□□□□□ -1.29
SLC1A1P43005 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SLC1A1P43005 CASC19-228ENST00000641414 1684 ntBASIC7.01□□□□□ -1.29
SLC1A1P43005 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.01□□□□□ -1.29
SLC1A1P43005 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SLC1A1P43005 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SLC1A1P43005 STAG3L4-201ENST00000352103 530 ntBASIC7.01□□□□□ -1.29
SLC1A1P43005 RNU1-46P-201ENST00000384425 164 ntBASIC7.01□□□□□ -1.29
SLC1A1P43005 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SLC1A1P43005 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SLC1A1P43005 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SLC1A1P43005 SNORA11D-201ENST00000408548 128 ntBASIC7.01□□□□□ -1.29
SLC1A1P43005 SNORA11E-201ENST00000408778 128 ntBASIC7.01□□□□□ -1.29
SLC1A1P43005 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SLC1A1P43005 AL353626.3-201ENST00000413399 657 ntBASIC7.01□□□□□ -1.29
SLC1A1P43005 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SLC1A1P43005 AL590128.1-201ENST00000433407 286 ntBASIC7.01□□□□□ -1.29
SLC1A1P43005 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.01□□□□□ -1.29
SLC1A1P43005 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC7.01□□□□□ -1.29
SLC1A1P43005 RPL7AP71-201ENST00000451120 739 ntBASIC7.01□□□□□ -1.29
SLC1A1P43005 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.01□□□□□ -1.29
SLC1A1P43005 AC115223.1-201ENST00000466377 870 ntBASIC7.01□□□□□ -1.29
SLC1A1P43005 RPS16P9-201ENST00000477220 427 ntBASIC7.01□□□□□ -1.29
SLC1A1P43005 RN7SKP242-201ENST00000515967 289 ntBASIC7.01□□□□□ -1.29
SLC1A1P43005 RNA5SP116-201ENST00000516132 98 ntBASIC7.01□□□□□ -1.29
SLC1A1P43005 KCTD9P4-201ENST00000526766 1166 ntBASIC7.01□□□□□ -1.29
SLC1A1P43005 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SLC1A1P43005 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.01□□□□□ -1.29
SLC1A1P43005 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.01□□□□□ -1.29
SLC1A1P43005 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.01□□□□□ -1.29
SLC1A1P43005 PTCHD3P1-201ENST00000612350 537 ntBASIC7.01□□□□□ -1.29
SLC1A1P43005 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC7.01□□□□□ -1.29
SLC1A1P43005 AC243725.1-201ENST00000637164 436 ntBASIC7.01□□□□□ -1.29
SLC1A1P43005 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SLC1A1P43005 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SLC1A1P43005 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC7.01□□□□□ -1.29
SLC1A1P43005 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SLC1A1P43005 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SLC1A1P43005 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC7.01□□□□□ -1.29
SLC1A1P43005 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SLC1A1P43005 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SLC1A1P43005 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SLC1A1P43005 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
SLC1A1P43005 AC005332.9-201ENST00000620266 2921 ntBASIC7□□□□□ -1.29
SLC1A1P43005 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
SLC1A1P43005 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms