Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.19□□□□□ -1.42
APOBEC1P41238 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.19□□□□□ -1.42
APOBEC1P41238 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.19□□□□□ -1.42
APOBEC1P41238 CRYGGP-201ENST00000443337 145 ntBASIC6.19□□□□□ -1.42
APOBEC1P41238 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.19□□□□□ -1.42
APOBEC1P41238 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.19□□□□□ -1.42
APOBEC1P41238 RN7SL390P-201ENST00000470634 284 ntBASIC6.19□□□□□ -1.42
APOBEC1P41238 RN7SL216P-201ENST00000471607 298 ntBASIC6.19□□□□□ -1.42
APOBEC1P41238 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.19□□□□□ -1.42
APOBEC1P41238 AC117395.1-201ENST00000487390 403 ntBASIC6.19□□□□□ -1.42
APOBEC1P41238 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.19□□□□□ -1.42
APOBEC1P41238 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.19□□□□□ -1.42
APOBEC1P41238 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC6.19□□□□□ -1.42
APOBEC1P41238 SNX18P23-201ENST00000510867 677 ntBASIC6.19□□□□□ -1.42
APOBEC1P41238 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.19□□□□□ -1.42
APOBEC1P41238 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.19□□□□□ -1.42
APOBEC1P41238 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.19□□□□□ -1.42
APOBEC1P41238 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.19□□□□□ -1.42
APOBEC1P41238 AC013731.1-201ENST00000604340 883 ntBASIC6.19□□□□□ -1.42
APOBEC1P41238 MRPL57P3-201ENST00000619218 176 ntBASIC6.19□□□□□ -1.42
APOBEC1P41238 AC027506.1-201ENST00000621395 198 ntBASIC6.19□□□□□ -1.42
APOBEC1P41238 AC117503.3-201ENST00000623811 601 ntBASIC6.19□□□□□ -1.42
APOBEC1P41238 AC073857.1-201ENST00000625082 1054 ntBASIC6.19□□□□□ -1.42
APOBEC1P41238 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
APOBEC1P41238 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
APOBEC1P41238 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
APOBEC1P41238 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
APOBEC1P41238 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
APOBEC1P41238 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
APOBEC1P41238 MAPK10-323ENST00000641493 3207 ntBASIC6.19□□□□□ -1.42
APOBEC1P41238 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
APOBEC1P41238 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.19□□□□□ -1.42
APOBEC1P41238 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC6.19□□□□□ -1.42
APOBEC1P41238 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
APOBEC1P41238 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.19□□□□□ -1.42
APOBEC1P41238 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
APOBEC1P41238 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
APOBEC1P41238 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
APOBEC1P41238 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.18□□□□□ -1.42
APOBEC1P41238 TRIM53CP-201ENST00000531490 1354 ntBASIC6.18□□□□□ -1.42
APOBEC1P41238 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
APOBEC1P41238 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
APOBEC1P41238 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
APOBEC1P41238 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
APOBEC1P41238 FADS2P1-201ENST00000611807 1446 ntBASIC6.18□□□□□ -1.42
APOBEC1P41238 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.18□□□□□ -1.42
APOBEC1P41238 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.18□□□□□ -1.42
APOBEC1P41238 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
APOBEC1P41238 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
APOBEC1P41238 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
APOBEC1P41238 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
APOBEC1P41238 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
APOBEC1P41238 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
APOBEC1P41238 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
APOBEC1P41238 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
APOBEC1P41238 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
APOBEC1P41238 RNA5SP429-201ENST00000363688 109 ntBASIC6.18□□□□□ -1.42
APOBEC1P41238 AL139100.1-201ENST00000408001 498 ntBASIC6.18□□□□□ -1.42
APOBEC1P41238 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.18□□□□□ -1.42
APOBEC1P41238 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.18□□□□□ -1.42
APOBEC1P41238 MTND1P10-201ENST00000426108 832 ntBASIC6.18□□□□□ -1.42
APOBEC1P41238 KATNBL1P2-201ENST00000433311 835 ntBASIC6.18□□□□□ -1.42
APOBEC1P41238 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.18□□□□□ -1.42
APOBEC1P41238 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.18□□□□□ -1.42
APOBEC1P41238 SCDP1-201ENST00000455244 1081 ntBASIC6.18□□□□□ -1.42
APOBEC1P41238 EIF3LP2-201ENST00000457262 807 ntBASIC6.18□□□□□ -1.42
APOBEC1P41238 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC6.18□□□□□ -1.42
APOBEC1P41238 RN7SL654P-201ENST00000479178 292 ntBASIC6.18□□□□□ -1.42
APOBEC1P41238 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.18□□□□□ -1.42
APOBEC1P41238 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.18□□□□□ -1.42
APOBEC1P41238 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
APOBEC1P41238 RBMS2P1-201ENST00000525031 1226 ntBASIC6.18□□□□□ -1.42
APOBEC1P41238 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.18□□□□□ -1.42
APOBEC1P41238 OR5BK1P-201ENST00000550421 823 ntBASIC6.18□□□□□ -1.42
APOBEC1P41238 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
APOBEC1P41238 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.18□□□□□ -1.42
APOBEC1P41238 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.18□□□□□ -1.42
APOBEC1P41238 RN7SL131P-201ENST00000579043 256 ntBASIC6.18□□□□□ -1.42
APOBEC1P41238 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.18□□□□□ -1.42
APOBEC1P41238 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.18□□□□□ -1.42
APOBEC1P41238 AL035410.2-201ENST00000604963 864 ntBASIC6.18□□□□□ -1.42
APOBEC1P41238 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.18□□□□□ -1.42
APOBEC1P41238 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
APOBEC1P41238 AC007204.1-201ENST00000621794 555 ntBASIC6.18□□□□□ -1.42
APOBEC1P41238 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.18□□□□□ -1.42
APOBEC1P41238 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.18□□□□□ -1.42
APOBEC1P41238 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.18□□□□□ -1.42
APOBEC1P41238 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
APOBEC1P41238 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
APOBEC1P41238 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.18□□□□□ -1.42
APOBEC1P41238 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
APOBEC1P41238 Z97989.1-201ENST00000531702 2421 ntBASIC6.18□□□□□ -1.42
APOBEC1P41238 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
APOBEC1P41238 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
APOBEC1P41238 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.18□□□□□ -1.42
APOBEC1P41238 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
APOBEC1P41238 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
APOBEC1P41238 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
APOBEC1P41238 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
APOBEC1P41238 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms