Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.77□□□□□ -1.33
CDH3P22223 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CDH3P22223 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.77□□□□□ -1.33
CDH3P22223 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CDH3P22223 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
CDH3P22223 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CDH3P22223 RNU6-233P-201ENST00000410845 141 ntBASIC6.77□□□□□ -1.33
CDH3P22223 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.77□□□□□ -1.33
CDH3P22223 CHCHD3P1-201ENST00000425516 676 ntBASIC6.77□□□□□ -1.33
CDH3P22223 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.77□□□□□ -1.33
CDH3P22223 AC074386.1-206ENST00000487102 761 ntBASIC6.77□□□□□ -1.33
CDH3P22223 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.77□□□□□ -1.33
CDH3P22223 RPL5P11-201ENST00000498068 893 ntBASIC6.77□□□□□ -1.33
CDH3P22223 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.77□□□□□ -1.33
CDH3P22223 SUMO2P19-201ENST00000518920 295 ntBASIC6.77□□□□□ -1.33
CDH3P22223 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.77□□□□□ -1.33
CDH3P22223 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.77□□□□□ -1.33
CDH3P22223 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.77□□□□□ -1.33
CDH3P22223 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.77□□□□□ -1.33
CDH3P22223 AL365223.1-201ENST00000574864 1297 ntBASIC6.77□□□□□ -1.33
CDH3P22223 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.77□□□□□ -1.33
CDH3P22223 MIR4428-201ENST00000584884 73 ntBASIC6.77□□□□□ -1.33
CDH3P22223 AC011447.2-201ENST00000592921 283 ntBASIC6.77□□□□□ -1.33
CDH3P22223 RPS27AP19-201ENST00000597285 458 ntBASIC6.77□□□□□ -1.33
CDH3P22223 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.77□□□□□ -1.33
CDH3P22223 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC6.77□□□□□ -1.33
CDH3P22223 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
CDH3P22223 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CDH3P22223 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
CDH3P22223 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
CDH3P22223 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.77□□□□□ -1.33
CDH3P22223 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CDH3P22223 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.77□□□□□ -1.33
CDH3P22223 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.77□□□□□ -1.33
CDH3P22223 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.77□□□□□ -1.33
CDH3P22223 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CDH3P22223 AC073365.1-203ENST00000641055 1992 ntBASIC6.77□□□□□ -1.33
CDH3P22223 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CDH3P22223 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CDH3P22223 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDH3P22223 BX284613.1-201ENST00000452221 1641 ntBASIC6.76□□□□□ -1.33
CDH3P22223 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CDH3P22223 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDH3P22223 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.76□□□□□ -1.33
CDH3P22223 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CDH3P22223 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDH3P22223 MAPK10-344ENST00000641718 3746 ntBASIC6.76□□□□□ -1.33
CDH3P22223 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CDH3P22223 MIR99A-201ENST00000384906 81 ntBASIC6.76□□□□□ -1.33
CDH3P22223 AL359715.1-201ENST00000404330 555 ntBASIC6.76□□□□□ -1.33
CDH3P22223 AC007365.2-201ENST00000428806 458 ntBASIC6.76□□□□□ -1.33
CDH3P22223 AL604028.2-201ENST00000437848 788 ntBASIC6.76□□□□□ -1.33
CDH3P22223 BMS1P11-201ENST00000442351 885 ntBASIC6.76□□□□□ -1.33
CDH3P22223 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.76□□□□□ -1.33
CDH3P22223 AGKP1-201ENST00000455254 1263 ntBASIC6.76□□□□□ -1.33
CDH3P22223 BMS1P9-201ENST00000457640 885 ntBASIC6.76□□□□□ -1.33
CDH3P22223 RN7SL492P-201ENST00000460700 295 ntBASIC6.76□□□□□ -1.33
CDH3P22223 RN7SL160P-201ENST00000468558 284 ntBASIC6.76□□□□□ -1.33
CDH3P22223 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.76□□□□□ -1.33
CDH3P22223 IGLC4-201ENST00000517690 248 ntBASIC6.76□□□□□ -1.33
CDH3P22223 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.76□□□□□ -1.33
CDH3P22223 CARSP2-201ENST00000520688 277 ntBASIC6.76□□□□□ -1.33
CDH3P22223 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.76□□□□□ -1.33
CDH3P22223 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC6.76□□□□□ -1.33
CDH3P22223 AC010287.1-201ENST00000566916 357 ntBASIC6.76□□□□□ -1.33
CDH3P22223 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC6.76□□□□□ -1.33
CDH3P22223 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.76□□□□□ -1.33
CDH3P22223 AC100832.2-201ENST00000582080 776 ntBASIC6.76□□□□□ -1.33
CDH3P22223 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC6.76□□□□□ -1.33
CDH3P22223 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.76□□□□□ -1.33
CDH3P22223 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CDH3P22223 AL352984.2-201ENST00000611153 546 ntBASIC6.76□□□□□ -1.33
CDH3P22223 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.76□□□□□ -1.33
CDH3P22223 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CDH3P22223 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CDH3P22223 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDH3P22223 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
CDH3P22223 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CDH3P22223 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDH3P22223 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.76□□□□□ -1.33
CDH3P22223 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDH3P22223 CDY19P-201ENST00000411668 1613 ntBASIC6.76□□□□□ -1.33
CDH3P22223 CDY18P-201ENST00000438294 1609 ntBASIC6.76□□□□□ -1.33
CDH3P22223 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CDH3P22223 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDH3P22223 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
CDH3P22223 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDH3P22223 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
CDH3P22223 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.75□□□□□ -1.33
CDH3P22223 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDH3P22223 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDH3P22223 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.75□□□□□ -1.33
CDH3P22223 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
CDH3P22223 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDH3P22223 OLMALINC-203ENST00000641087 3779 ntBASIC6.75□□□□□ -1.33
CDH3P22223 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CDH3P22223 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDH3P22223 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDH3P22223 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDH3P22223 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms