Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
P04436 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
P04436 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.2□□□□□ -1.42
P04436 SNORA7A-201ENST00000384765 139 ntBASIC6.2□□□□□ -1.42
P04436 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.2□□□□□ -1.42
P04436 MORF4L1P5-201ENST00000433352 961 ntBASIC6.2□□□□□ -1.42
P04436 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.2□□□□□ -1.42
P04436 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.2□□□□□ -1.42
P04436 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.2□□□□□ -1.42
P04436 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC6.2□□□□□ -1.42
P04436 AL121578.2-201ENST00000448797 447 ntBASIC6.2□□□□□ -1.42
P04436 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
P04436 AC114324.2-202ENST00000503812 134 ntBASIC6.2□□□□□ -1.42
P04436 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.2□□□□□ -1.42
P04436 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.2□□□□□ -1.42
P04436 AC016144.1-201ENST00000548175 1087 ntBASIC6.2□□□□□ -1.42
P04436 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC6.2□□□□□ -1.42
P04436 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.2□□□□□ -1.42
P04436 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
P04436 MIR6885-201ENST00000612241 66 ntBASIC6.2□□□□□ -1.42
P04436 HTR1DP1-201ENST00000616500 888 ntBASIC6.2□□□□□ -1.42
P04436 MIR7854-201ENST00000620068 65 ntBASIC6.2□□□□□ -1.42
P04436 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.2□□□□□ -1.42
P04436 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.2□□□□□ -1.42
P04436 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.2□□□□□ -1.42
P04436 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
P04436 AC009948.3-201ENST00000603415 1798 ntBASIC6.2□□□□□ -1.42
P04436 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
P04436 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.2□□□□□ -1.42
P04436 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
P04436 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.2□□□□□ -1.42
P04436 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.2□□□□□ -1.42
P04436 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
P04436 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
P04436 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
P04436 AC122713.2-201ENST00000624942 3335 ntBASIC6.2□□□□□ -1.42
P04436 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
P04436 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
P04436 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
P04436 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
P04436 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
P04436 EPS15P1-202ENST00000459691 2071 ntBASIC6.19□□□□□ -1.42
P04436 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.19□□□□□ -1.42
P04436 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.19□□□□□ -1.42
P04436 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
P04436 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
P04436 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
P04436 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
P04436 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.19□□□□□ -1.42
P04436 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.19□□□□□ -1.42
P04436 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
P04436 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
P04436 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
P04436 RBPJP6-201ENST00000411556 1431 ntBASIC6.19□□□□□ -1.42
P04436 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
P04436 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
P04436 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
P04436 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
P04436 AC010894.1-201ENST00000313760 361 ntBASIC6.19□□□□□ -1.42
P04436 RNU1-5P-201ENST00000362684 144 ntBASIC6.19□□□□□ -1.42
P04436 RNU1-55P-201ENST00000365510 158 ntBASIC6.19□□□□□ -1.42
P04436 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
P04436 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
P04436 FDPSP5-201ENST00000399474 1057 ntBASIC6.19□□□□□ -1.42
P04436 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
P04436 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.19□□□□□ -1.42
P04436 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.19□□□□□ -1.42
P04436 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.19□□□□□ -1.42
P04436 AC239367.3-201ENST00000428996 814 ntBASIC6.19□□□□□ -1.42
P04436 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.19□□□□□ -1.42
P04436 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.19□□□□□ -1.42
P04436 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
P04436 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.19□□□□□ -1.42
P04436 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
P04436 AL031681.1-201ENST00000443304 400 ntBASIC6.19□□□□□ -1.42
P04436 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.19□□□□□ -1.42
P04436 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.19□□□□□ -1.42
P04436 KF459542.1-201ENST00000450908 553 ntBASIC6.19□□□□□ -1.42
P04436 RN7SL393P-201ENST00000463588 296 ntBASIC6.19□□□□□ -1.42
P04436 RN7SL83P-201ENST00000468131 297 ntBASIC6.19□□□□□ -1.42
P04436 RPS3AP49-201ENST00000472161 790 ntBASIC6.19□□□□□ -1.42
P04436 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.19□□□□□ -1.42
P04436 AC011352.2-201ENST00000514574 1016 ntBASIC6.19□□□□□ -1.42
P04436 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.19□□□□□ -1.42
P04436 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
P04436 OR9L1P-201ENST00000529493 933 ntBASIC6.19□□□□□ -1.42
P04436 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.19□□□□□ -1.42
P04436 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.19□□□□□ -1.42
P04436 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.19□□□□□ -1.42
P04436 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.19□□□□□ -1.42
P04436 ANP32BP1-202ENST00000568553 737 ntBASIC6.19□□□□□ -1.42
P04436 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
P04436 CTSLP2-201ENST00000580501 394 ntBASIC6.19□□□□□ -1.42
P04436 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.19□□□□□ -1.42
P04436 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.19□□□□□ -1.42
P04436 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.19□□□□□ -1.42
P04436 AC091768.1-201ENST00000609258 930 ntBASIC6.19□□□□□ -1.42
P04436 AC016590.3-201ENST00000611171 753 ntBASIC6.19□□□□□ -1.42
P04436 AC211486.4-201ENST00000621495 113 ntBASIC6.19□□□□□ -1.42
P04436 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms