Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AP000432.2-201ENST00000624164 2048 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 RN7SKP47-201ENST00000365347 328 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AL050335.1-201ENST00000396909 869 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 RN7SKP161-201ENST00000411110 305 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 EEF1A1P34-201ENST00000419888 1267 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 DDX11L10-201ENST00000430178 571 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 RPS13P2-201ENST00000437890 455 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC002553.1-201ENST00000442828 802 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 REG1CP-206ENST00000447469 496 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 OR51P1P-201ENST00000447547 942 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 SNORA81.1-201ENST00000458922 177 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 GAPDHP38-201ENST00000503632 1002 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AP000619.1-201ENST00000540293 1000 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC096708.2-201ENST00000577676 512 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 MIR3689C-201ENST00000581239 72 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 RPS27AP19-201ENST00000597285 458 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AP001267.4-201ENST00000602598 545 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 RPS28P1-201ENST00000604589 187 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 MIR6762-201ENST00000613340 86 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC243830.3-201ENST00000616810 376 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 SPINK6-203ENST00000621437 605 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AP003068.4-201ENST00000623192 802 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC110769.3-201ENST00000624567 1173 ntBASIC5.04□□□□□ -1.6
HLA-DQA1P01909 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5.04□□□□□ -1.6
HLA-DQA1P01909 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 AC027575.3-201ENST00000583058 2747 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 WASF5P-205ENST00000428639 1455 ntBASIC5.03□□□□□ -1.6
HLA-DQA1P01909 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.03□□□□□ -1.6
HLA-DQA1P01909 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms