Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 RN7SKP130-201ENST00000364924 301 ntBASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 AL353133.1-201ENST00000407695 401 ntBASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 HMGN1P6-201ENST00000438508 291 ntBASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 OR51P1P-201ENST00000447547 942 ntBASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 AC005165.2-201ENST00000466070 380 ntBASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 AC021074.2-201ENST00000468434 172 ntBASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 RN7SL70P-201ENST00000478322 302 ntBASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 MTCYBP44-201ENST00000514835 823 ntBASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 AC007537.1-201ENST00000539347 327 ntBASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 AC138207.8-204ENST00000579588 527 ntBASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 RPS4XP21-201ENST00000603814 750 ntBASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 AC211486.4-201ENST00000621495 113 ntBASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 ATP5BP1-201ENST00000411980 1574 ntBASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 AC087392.3-202ENST00000358446 1754 ntBASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
NPIPA3F8WFD2 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 DLEU2L-201ENST00000371086 3555 ntBASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 RNA5SP382-201ENST00000363355 112 ntBASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 LSM3P3-201ENST00000436601 306 ntBASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 AC002486.2-201ENST00000447806 590 ntBASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 RN7SL836P-201ENST00000476140 296 ntBASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 RPS7P11-201ENST00000484240 586 ntBASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 AC093878.1-201ENST00000515630 432 ntBASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC6.25□□□□□ -1.41
NPIPA3F8WFD2 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms