Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 IL6ST-206ENST00000381298 9057 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 AC114980.1-201ENST00000505668 3157 ntBASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC10.26□□□□□ -0.77
RIMBP3Q9UFD9 RN7SKP124-201ENST00000364730 341 ntBASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 AL121916.1-201ENST00000429405 308 ntBASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 EEF1B2P5-201ENST00000444820 548 ntBASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 AC090142.2-201ENST00000483263 416 ntBASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 RPL34P33-201ENST00000486062 334 ntBASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 AC131392.1-201ENST00000506490 633 ntBASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 AC138866.2-201ENST00000508650 584 ntBASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 SETP21-201ENST00000514799 892 ntBASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 OR7E101P-201ENST00000400428 513 ntBASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 RPL23AP27-201ENST00000415161 451 ntBASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 AL356981.1-201ENST00000454879 684 ntBASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 AC146944.3-201ENST00000509969 371 ntBASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 MIR3135A-201ENST00000578460 77 ntBASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 MIR4436B2-201ENST00000581415 91 ntBASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 MIR4436B1-201ENST00000583272 91 ntBASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 AGPAT4-201ENST00000320285 7865 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
RIMBP3Q9UFD9 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 SSFA2-203ENST00000409136 3610 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 ZKSCAN5-201ENST00000326775 4178 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 AC023824.7-201ENST00000623041 5731 ntBASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 AL353743.3-201ENST00000442109 1468 ntBASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 ICOSLG-204ENST00000407780 7080 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 RNU1-134P-201ENST00000362935 165 ntBASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 GAS5-218ENST00000448718 565 ntTSL 2 BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 AC009963.2-201ENST00000453431 138 ntBASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 AC004453.1-201ENST00000487895 408 ntBASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 HIGD1AP14-201ENST00000507617 282 ntBASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 RBMY1HP-201ENST00000382759 1389 ntBASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 CDH11-202ENST00000394156 6874 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RIMBP3Q9UFD9 GID8-201ENST00000266069 4397 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 MXRA5Y-201ENST00000420610 8000 ntBASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 AC008758.1-201ENST00000428311 4505 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 RPRD2-202ENST00000369068 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 CREB1-206ENST00000432329 7650 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 RN7SKP273-201ENST00000411392 314 ntBASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 GYG1P1-201ENST00000460864 698 ntBASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 PRELID3BP5-201ENST00000508612 460 ntBASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 AP004607.2-201ENST00000533949 322 ntBASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 AC013283.1-201ENST00000557282 492 ntBASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC10.23□□□□□ -0.77
RIMBP3Q9UFD9 CLN8-201ENST00000331222 7169 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms