Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 RN7SKP184-201ENST00000362348 333 ntBASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 RPSAP60-201ENST00000415403 880 ntBASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 AHCYP8-201ENST00000425108 209 ntBASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 AC013403.1-201ENST00000436954 263 ntBASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 YRDCP3-201ENST00000456507 480 ntBASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 MINOS1P4-201ENST00000515470 318 ntBASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 AC010442.1-201ENST00000515583 816 ntBASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 OR4C49P-201ENST00000563891 900 ntBASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 PPIAP14-201ENST00000577627 496 ntBASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 AC020914.7-201ENST00000594477 545 ntBASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 AC036176.3-201ENST00000602456 418 ntBASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 AC087269.2-201ENST00000641764 975 ntBASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 LRRC37A12P-201ENST00000454917 1801 ntBASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CLIP2Q9UDT6 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 AP000866.6-201ENST00000638898 3579 ntBASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 RBPJP6-201ENST00000411556 1431 ntBASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 RN7SKP62-201ENST00000384539 329 ntBASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 ERMN-202ENST00000409216 746 ntTSL 4 BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 NPM1P36-201ENST00000415681 835 ntBASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 FAM183DP-201ENST00000421987 399 ntBASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 SPATA20P1-201ENST00000423089 438 ntBASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 AL121578.2-201ENST00000448797 447 ntBASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 AC135721.2-201ENST00000464237 300 ntBASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 AC083806.1-201ENST00000468934 316 ntBASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 RN7SL654P-201ENST00000479178 292 ntBASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 RN7SL502P-201ENST00000481857 290 ntBASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 NACAP5-201ENST00000509863 636 ntBASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 OR4A21P-201ENST00000532759 944 ntBASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 DPPA3P2-201ENST00000553589 478 ntBASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 AL035410.2-201ENST00000604963 864 ntBASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 AC127071.2-201ENST00000623293 527 ntBASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 AC008957.3-201ENST00000624112 2242 ntBASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 AC007406.5-201ENST00000570140 3170 ntBASIC8.06□□□□□ -1.12
CLIP2Q9UDT6 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CLIP2Q9UDT6 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms