Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 PCNAP3-201ENST00000397222 778 ntBASIC8.17□□□□□ -1.1
UPF2Q9HAU5 OR7E91P-201ENST00000400027 866 ntBASIC8.17□□□□□ -1.1
UPF2Q9HAU5 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 AC007365.2-201ENST00000428806 458 ntBASIC8.17□□□□□ -1.1
UPF2Q9HAU5 AL645936.2-201ENST00000430565 928 ntBASIC8.17□□□□□ -1.1
UPF2Q9HAU5 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 RN7SL223P-201ENST00000470401 294 ntBASIC8.17□□□□□ -1.1
UPF2Q9HAU5 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 EIF4A3P1-201ENST00000578499 647 ntBASIC8.17□□□□□ -1.1
UPF2Q9HAU5 AL360169.2-201ENST00000619713 561 ntTSL 5 BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 AC087894.3-201ENST00000623682 349 ntBASIC8.17□□□□□ -1.1
UPF2Q9HAU5 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 AL512329.1-201ENST00000404600 1592 ntBASIC8.17□□□□□ -1.1
UPF2Q9HAU5 AC062022.1-201ENST00000451026 1684 ntBASIC8.17□□□□□ -1.1
UPF2Q9HAU5 AL355377.1-201ENST00000621125 1653 ntBASIC8.17□□□□□ -1.1
UPF2Q9HAU5 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
UPF2Q9HAU5 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 RNU4-81P-201ENST00000363561 144 ntBASIC8.16□□□□□ -1.1
UPF2Q9HAU5 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 AC090114.1-201ENST00000393266 448 ntBASIC8.16□□□□□ -1.1
UPF2Q9HAU5 AL050335.1-201ENST00000396909 869 ntBASIC8.16□□□□□ -1.1
UPF2Q9HAU5 RNU4-64P-201ENST00000410795 131 ntBASIC8.16□□□□□ -1.1
UPF2Q9HAU5 AL157698.1-201ENST00000415190 1011 ntBASIC8.16□□□□□ -1.1
UPF2Q9HAU5 PPIL1P1-201ENST00000423936 499 ntBASIC8.16□□□□□ -1.1
UPF2Q9HAU5 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 Z68868.1-201ENST00000429048 544 ntBASIC8.16□□□□□ -1.1
UPF2Q9HAU5 PAICSP2-201ENST00000429118 1150 ntBASIC8.16□□□□□ -1.1
UPF2Q9HAU5 FTLP17-201ENST00000432567 525 ntBASIC8.16□□□□□ -1.1
UPF2Q9HAU5 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 RN7SL308P-201ENST00000464971 297 ntBASIC8.16□□□□□ -1.1
UPF2Q9HAU5 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 RN7SKP248-201ENST00000516278 305 ntBASIC8.16□□□□□ -1.1
UPF2Q9HAU5 AP001803.1-201ENST00000525668 147 ntBASIC8.16□□□□□ -1.1
UPF2Q9HAU5 AP005639.1-201ENST00000526939 192 ntBASIC8.16□□□□□ -1.1
UPF2Q9HAU5 HIGD1AP9-201ENST00000550710 279 ntBASIC8.16□□□□□ -1.1
UPF2Q9HAU5 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 AC006116.6-201ENST00000593258 1103 ntBASIC8.16□□□□□ -1.1
UPF2Q9HAU5 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 5S_rRNA.23-201ENST00000612086 102 ntBASIC8.16□□□□□ -1.1
UPF2Q9HAU5 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 MIR6732-201ENST00000619365 60 ntBASIC8.16□□□□□ -1.1
UPF2Q9HAU5 AC105749.1-201ENST00000631338 2008 ntBASIC8.16□□□□□ -1.1
UPF2Q9HAU5 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 AC079753.1-201ENST00000623243 3868 ntBASIC8.16□□□□□ -1.1
UPF2Q9HAU5 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
UPF2Q9HAU5 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
UPF2Q9HAU5 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC8.15□□□□□ -1.1
UPF2Q9HAU5 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
UPF2Q9HAU5 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
UPF2Q9HAU5 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
UPF2Q9HAU5 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
UPF2Q9HAU5 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC8.15□□□□□ -1.1
UPF2Q9HAU5 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
UPF2Q9HAU5 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC8.15□□□□□ -1.1
UPF2Q9HAU5 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC8.15□□□□□ -1.1
UPF2Q9HAU5 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
UPF2Q9HAU5 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
UPF2Q9HAU5 SNORD8-201ENST00000363915 110 ntBASIC8.15□□□□□ -1.1
UPF2Q9HAU5 RNU1-55P-201ENST00000365510 158 ntBASIC8.15□□□□□ -1.1
UPF2Q9HAU5 AL451142.1-201ENST00000375867 775 ntBASIC8.15□□□□□ -1.1
UPF2Q9HAU5 RPS3AP5-201ENST00000389400 821 ntBASIC8.15□□□□□ -1.1
UPF2Q9HAU5 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC8.15□□□□□ -1.1
UPF2Q9HAU5 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
UPF2Q9HAU5 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC8.15□□□□□ -1.1
UPF2Q9HAU5 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC8.15□□□□□ -1.1
UPF2Q9HAU5 ZBTB8OSP2-201ENST00000423890 504 ntBASIC8.15□□□□□ -1.1
UPF2Q9HAU5 GAPDHP57-201ENST00000424400 585 ntBASIC8.15□□□□□ -1.1
UPF2Q9HAU5 AC105052.2-201ENST00000434317 794 ntBASIC8.15□□□□□ -1.1
UPF2Q9HAU5 RPS13P2-201ENST00000437890 455 ntBASIC8.15□□□□□ -1.1
UPF2Q9HAU5 AC090954.1-201ENST00000445502 361 ntBASIC8.15□□□□□ -1.1
UPF2Q9HAU5 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC8.15□□□□□ -1.1
UPF2Q9HAU5 AC092824.1-201ENST00000483524 576 ntBASIC8.15□□□□□ -1.1
UPF2Q9HAU5 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC8.15□□□□□ -1.1
UPF2Q9HAU5 AC087360.1-201ENST00000518788 616 ntBASIC8.15□□□□□ -1.1
UPF2Q9HAU5 OR5M4P-201ENST00000529436 925 ntBASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms