Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 CREM-242ENST00000490511 469 ntTSL 2 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 RN7SL306P-201ENST00000492941 296 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AC027801.3-201ENST00000515049 698 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AC007537.1-201ENST00000539347 327 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AC068305.2-201ENST00000550567 1205 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AC096708.2-201ENST00000577676 512 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 DIMT1P1-201ENST00000603970 763 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 API5P1-201ENST00000424316 1510 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 RN7SKP15-201ENST00000364742 309 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 PKIB-203ENST00000368446 556 ntTSL 2 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 TINAG-202ENST00000370864 692 ntTSL 2 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 CHEK2P5-201ENST00000423877 246 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 ZNF519P4-201ENST00000514008 125 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AC137549.1-201ENST00000514243 533 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 RPL29P33-201ENST00000587474 316 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 AC104184.1-201ENST00000607513 721 ntBASIC2.09□□□□□ -2.07
SYNE1Q8NF91 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SYNE1Q8NF91 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 AC084782.1-201ENST00000564401 2465 ntBASIC2.09□□□□□ -2.08
SYNE1Q8NF91 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 AL121835.2-201ENST00000624253 3502 ntBASIC2.09□□□□□ -2.08
SYNE1Q8NF91 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 CTSLP6-201ENST00000458273 1002 ntBASIC2.09□□□□□ -2.08
SYNE1Q8NF91 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 CETN3-206ENST00000522864 738 ntTSL 3 BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 NXPE2P1-201ENST00000543705 726 ntBASIC2.09□□□□□ -2.08
SYNE1Q8NF91 AC124916.2-201ENST00000604416 224 ntBASIC2.09□□□□□ -2.08
SYNE1Q8NF91 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 OR2AH1P-202ENST00000641232 2744 ntBASIC2.09□□□□□ -2.08
SYNE1Q8NF91 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 AP003486.1-201ENST00000525716 3994 ntBASIC2.09□□□□□ -2.08
SYNE1Q8NF91 ODF3-202ENST00000342593 386 ntTSL 5 BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 RNU1-55P-201ENST00000365510 158 ntBASIC2.09□□□□□ -2.08
SYNE1Q8NF91 AC019178.1-201ENST00000392337 440 ntBASIC2.09□□□□□ -2.08
SYNE1Q8NF91 UBBP1-201ENST00000392399 473 ntBASIC2.09□□□□□ -2.08
SYNE1Q8NF91 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 AC005726.4-201ENST00000582858 458 ntBASIC2.09□□□□□ -2.08
SYNE1Q8NF91 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 AL359195.2-201ENST00000623657 4412 ntBASIC2.09□□□□□ -2.08
SYNE1Q8NF91 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 PRELID1P1-201ENST00000403549 660 ntBASIC2.09□□□□□ -2.08
SYNE1Q8NF91 VN1R12P-201ENST00000403778 876 ntBASIC2.09□□□□□ -2.08
SYNE1Q8NF91 AL022100.1-202ENST00000421214 548 ntBASIC2.09□□□□□ -2.08
SYNE1Q8NF91 RN7SL168P-201ENST00000463821 279 ntBASIC2.09□□□□□ -2.08
SYNE1Q8NF91 SCARNA18.2-201ENST00000516882 84 ntBASIC2.09□□□□□ -2.08
SYNE1Q8NF91 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC2.09□□□□□ -2.08
SYNE1Q8NF91 AC140479.4-205ENST00000636339 820 ntBASIC2.09□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms