Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 ELP3-219ENST00000537665 3053 ntTSL 2 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 DNAI1-201ENST00000242317 2504 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 BCO2-201ENST00000357685 2930 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AC078881.1-201ENST00000507023 2161 ntTSL 2 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 RBP2-201ENST00000232217 694 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 SPRR3-201ENST00000295367 878 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AP000769.1-204ENST00000309775 800 ntTSL 5 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 OR2T6-201ENST00000355728 927 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 BEND6-201ENST00000370745 579 ntTSL 5 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 LRMDA-201ENST00000372499 899 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 SNORA48.6-201ENST00000391156 130 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 OR6C69P-201ENST00000394268 893 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 SCIMP-201ENST00000399600 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AC008770.1-201ENST00000406892 1257 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 TYMSP1-201ENST00000407851 869 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 MIR548F1-201ENST00000408667 84 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AC013404.1-201ENST00000413068 249 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 HCG18-234ENST00000413358 916 ntTSL 3 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 RPL4P5-201ENST00000413888 1276 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 RPS7P13-201ENST00000413955 498 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 RPS26P38-201ENST00000414476 348 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AC092810.3-201ENST00000416349 473 ntTSL 3 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AC008781.1-201ENST00000422040 621 ntTSL 3 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AC104651.1-201ENST00000427559 735 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 ARL6IP1P2-201ENST00000431356 563 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AC007349.2-201ENST00000439998 553 ntTSL 2 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 MICC-201ENST00000445710 1055 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 GRPEL2P3-201ENST00000448626 640 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 LINC02543-201ENST00000451285 845 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 HNRNPA1P43-201ENST00000452680 910 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 ZNF337-AS1-206ENST00000455791 650 ntTSL 3 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 DNAJC9-AS1-202ENST00000457147 762 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 C3orf67-AS1-201ENST00000463703 562 ntTSL 4 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 SRD5A3-AS1-202ENST00000510637 926 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 NPM1P6-201ENST00000521088 871 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AC092709.1-201ENST00000521355 1045 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 ANKRD42-206ENST00000528722 954 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 OR4A43P-201ENST00000532938 908 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 CXorf56-203ENST00000536133 1089 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 SMAD3-203ENST00000537194 1147 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 ACTR3C-205ENST00000539352 570 ntTSL 5 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AC012038.1-201ENST00000551279 552 ntTSL 4 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 OR11K1P-201ENST00000558299 904 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AC118658.1-201ENST00000560221 334 ntTSL 5 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 FRG2GP-201ENST00000567870 615 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 SSH2-209ENST00000579954 428 ntTSL 3 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 SLC25A36P1-201ENST00000590111 465 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 LINC01483-205ENST00000591334 620 ntTSL 4 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 LSM1P2-201ENST00000604911 322 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AP001425.1-202ENST00000605450 1063 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 HOXA11-AS1_2.1-201ENST00000615604 187 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AC245505.3-201ENST00000616788 358 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 CCR9-203ENST00000395963 2512 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 FBXW7-204ENST00000393956 1735 ntTSL 2 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 CYP4Z2P-201ENST00000423332 1512 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 TP63-211ENST00000449992 1506 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 PSMA5-206ENST00000538610 1504 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AC006213.6-201ENST00000623722 4179 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AC016251.1-201ENST00000624299 4198 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 CTBP2P2-201ENST00000434549 1334 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 AC092718.7-201ENST00000623577 1776 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 ZNF559-211ENST00000592504 1398 ntTSL 2 BASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 EEF1A1P7-201ENST00000596811 1394 ntBASIC7.97□□□□□ -1.13
DEPDC4Q8N2C3 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
DEPDC4Q8N2C3 SH3D19-204ENST00000427414 2656 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.13
DEPDC4Q8N2C3 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC7.96□□□□□ -1.13
DEPDC4Q8N2C3 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC7.96□□□□□ -1.13
DEPDC4Q8N2C3 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms