Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 RSL24D1P11-201ENST00000591045 491 ntBASIC7.06□□□□□ -1.28
ATG4DQ86TL0 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 AC100767.2-201ENST00000604840 693 ntBASIC7.06□□□□□ -1.28
ATG4DQ86TL0 AC243772.3-202ENST00000609662 1148 ntBASIC7.06□□□□□ -1.28
ATG4DQ86TL0 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC7.06□□□□□ -1.28
ATG4DQ86TL0 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC7.06□□□□□ -1.28
ATG4DQ86TL0 MIR6829-201ENST00000620375 67 ntBASIC7.06□□□□□ -1.28
ATG4DQ86TL0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 MIR6723-201ENST00000621981 89 ntBASIC7.06□□□□□ -1.28
ATG4DQ86TL0 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 AC241585.4-201ENST00000640951 686 ntBASIC7.06□□□□□ -1.28
ATG4DQ86TL0 AC087885.1-201ENST00000641910 848 ntBASIC7.06□□□□□ -1.28
ATG4DQ86TL0 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 ZNF43-201ENST00000354959 2881 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
ATG4DQ86TL0 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AC096745.2-201ENST00000627783 1914 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 CDYLP1-201ENST00000419017 1458 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 NACA-216ENST00000550952 2922 ntTSL 2 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 MAPK10-313ENST00000641405 2469 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 GALNTL5-201ENST00000392800 1719 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 GUCY2F-201ENST00000218006 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AL138847.1-201ENST00000258651 546 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AC023490.2-201ENST00000359859 470 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 SNORA10-201ENST00000384084 133 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 SNORA10B-201ENST00000384458 133 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 SNORA70I-201ENST00000384544 135 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 Y_RNA.517-201ENST00000384551 106 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 PCNAP3-201ENST00000397222 778 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 RN7SKP207-201ENST00000411204 303 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AC093422.3-201ENST00000428506 305 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AC006326.1-201ENST00000445465 787 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 MYO5BP2-201ENST00000449815 1277 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 C1DP3-201ENST00000455013 423 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AL590326.1-201ENST00000460857 334 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 SUMO2P17-201ENST00000504438 285 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 OR7E1P-201ENST00000533891 958 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 OR4A6P-201ENST00000534364 970 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AC244502.2-201ENST00000543361 851 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 CENPUP2-201ENST00000555897 1186 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 C16orf45-203ENST00000561692 534 ntTSL 3 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AC244090.2-201ENST00000567614 792 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AC078795.3-201ENST00000602913 472 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 BUB1P1-201ENST00000603541 607 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AC079610.2-201ENST00000604818 690 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 RN7SL760P-201ENST00000607344 270 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AC026367.2-201ENST00000610630 553 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AC073114.1-201ENST00000612027 490 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AL121583.1-201ENST00000612444 682 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AC025253.1-201ENST00000613623 543 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AC104985.2-201ENST00000620598 500 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AP000851.2-201ENST00000629499 721 ntTSL 3 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 AC010653.3-201ENST00000635332 232 ntBASIC7.05□□□□□ -1.28
ATG4DQ86TL0 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC7.05□□□□□ -1.28
ATG4DQ86TL0 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms