Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC010480.1-201ENST00000624823 684 ntBASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
ZNF549Q6P9A3 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 FO082842.1-201ENST00000423552 1370 ntBASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 RBMY1A3P-201ENST00000382670 1404 ntBASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 AC020658.2-201ENST00000559030 4020 ntBASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 OR2M1P-201ENST00000318104 951 ntBASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 RPL31-202ENST00000409000 641 ntTSL 2 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 RN7SKP117-201ENST00000410175 264 ntBASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 AC245452.2-201ENST00000435222 392 ntBASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 AC239800.1-201ENST00000442049 719 ntBASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 AC017099.1-201ENST00000448261 1028 ntBASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 AC021820.1-201ENST00000525564 808 ntBASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 AP000240.1-201ENST00000609910 452 ntBASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 AC106782.7-201ENST00000624024 418 ntBASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 AC133555.5-201ENST00000624430 418 ntBASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 PABPC1P8-201ENST00000452851 2086 ntBASIC6.69□□□□□ -1.34
ZNF549Q6P9A3 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 ZNF806-201ENST00000438300 1774 ntBASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 EEF1GP6-201ENST00000402309 905 ntBASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 AC096537.2-201ENST00000413707 714 ntBASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 MTND1P10-201ENST00000426108 832 ntBASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 AL138479.1-201ENST00000426913 484 ntBASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 RPS26P11-201ENST00000463445 348 ntBASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 RN7SL390P-201ENST00000470634 284 ntBASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 UOX-201ENST00000471089 899 ntBASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 RPS26P6-201ENST00000475156 348 ntBASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 RN7SL654P-201ENST00000479178 292 ntBASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 AC017007.1-201ENST00000511960 415 ntBASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 HNRNPCP8-201ENST00000528764 888 ntBASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.68□□□□□ -1.34
ZNF549Q6P9A3 RN7SL689P-201ENST00000577215 297 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms