Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC093909.5-201ENST00000621839 1799 ntBASIC6.53□□□□□ -1.36
NKX6-1P78426 AL357556.1-201ENST00000421884 1388 ntBASIC6.53□□□□□ -1.36
NKX6-1P78426 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NKX6-1P78426 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC6.53□□□□□ -1.36
NKX6-1P78426 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.53□□□□□ -1.36
NKX6-1P78426 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC6.53□□□□□ -1.36
NKX6-1P78426 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
NKX6-1P78426 AC092646.2-201ENST00000431242 2095 ntBASIC6.53□□□□□ -1.36
NKX6-1P78426 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
NKX6-1P78426 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.36
NKX6-1P78426 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NKX6-1P78426 AC092821.2-201ENST00000545710 2042 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NKX6-1P78426 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.52□□□□□ -1.37
NKX6-1P78426 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.52□□□□□ -1.37
NKX6-1P78426 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
NKX6-1P78426 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC6.52□□□□□ -1.37
NKX6-1P78426 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NKX6-1P78426 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC6.52□□□□□ -1.37
NKX6-1P78426 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.52□□□□□ -1.37
NKX6-1P78426 AC023886.2-201ENST00000321285 411 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 AL034417.1-201ENST00000399343 800 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 SNORA11D-201ENST00000408548 128 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 SNORA11E-201ENST00000408778 128 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 GLUD1P9-201ENST00000420997 1173 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 TAS2R2P-201ENST00000421146 910 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 SNRK-AS1-201ENST00000422681 750 ntTSL 3 BASIC6.52□□□□□ -1.37
NKX6-1P78426 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC6.52□□□□□ -1.37
NKX6-1P78426 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC6.52□□□□□ -1.37
NKX6-1P78426 AC007563.3-201ENST00000433233 371 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 AC011242.1-201ENST00000433596 1158 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 AL954705.1-201ENST00000435277 559 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.52□□□□□ -1.37
NKX6-1P78426 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NKX6-1P78426 GTF2F2P2-201ENST00000445825 721 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 MTATP6P14-201ENST00000455189 673 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 AL354872.1-201ENST00000456361 967 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.52□□□□□ -1.37
NKX6-1P78426 RN7SL456P-201ENST00000469290 295 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC6.52□□□□□ -1.37
NKX6-1P78426 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC6.52□□□□□ -1.37
NKX6-1P78426 AC095059.2-201ENST00000510601 933 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 AC034244.2-201ENST00000514668 858 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 SCARNA20.1-201ENST00000516009 138 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 C1DP5-201ENST00000525775 383 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC6.52□□□□□ -1.37
NKX6-1P78426 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.52□□□□□ -1.37
NKX6-1P78426 C1GALT1P1-201ENST00000548895 1089 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 BMS1P15-201ENST00000554269 1141 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC6.52□□□□□ -1.37
NKX6-1P78426 MIR4437-201ENST00000581331 60 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.52□□□□□ -1.37
NKX6-1P78426 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.52□□□□□ -1.37
NKX6-1P78426 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC6.52□□□□□ -1.37
NKX6-1P78426 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.52□□□□□ -1.37
NKX6-1P78426 AC027449.1-201ENST00000608890 407 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 AC004477.3-201ENST00000614061 590 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 pRNA.12-201ENST00000614353 90 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 pRNA.3-201ENST00000615048 90 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 AL445528.2-201ENST00000620582 470 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 AL356118.1-201ENST00000635272 1078 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.52□□□□□ -1.37
NKX6-1P78426 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
NKX6-1P78426 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
NKX6-1P78426 MAPK10-350ENST00000641777 965 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 AC009237.3-203ENST00000442128 3551 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NKX6-1P78426 EEF1A1P5-201ENST00000436459 1389 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NKX6-1P78426 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
NKX6-1P78426 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NKX6-1P78426 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NKX6-1P78426 TCP1P3-201ENST00000414406 1498 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
NKX6-1P78426 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
NKX6-1P78426 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC6.52□□□□□ -1.37
NKX6-1P78426 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
NKX6-1P78426 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
NKX6-1P78426 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
NKX6-1P78426 CCAT2-201ENST00000630920 1752 ntBASIC6.52□□□□□ -1.37
NKX6-1P78426 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
NKX6-1P78426 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC6.51□□□□□ -1.37
NKX6-1P78426 RBPJP6-201ENST00000411556 1431 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 TRIM60P14-201ENST00000513444 1419 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 MTCO1P4-201ENST00000520516 1409 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC6.51□□□□□ -1.37
NKX6-1P78426 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
NKX6-1P78426 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.51□□□□□ -1.37
NKX6-1P78426 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
NKX6-1P78426 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
NKX6-1P78426 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC6.51□□□□□ -1.37
NKX6-1P78426 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
NKX6-1P78426 RNU6-1251P-201ENST00000364502 107 ntBASIC6.51□□□□□ -1.37
NKX6-1P78426 RNU1-122P-201ENST00000365538 156 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms