Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LYZ-202ENST00000548839 558 ntTSL 2 BASIC4.66□□□□□ -1.66
RPL39P62891 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RPL39P62891 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC4.66□□□□□ -1.66
RPL39P62891 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC4.66□□□□□ -1.66
RPL39P62891 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC4.66□□□□□ -1.66
RPL39P62891 AC012065.3-201ENST00000602736 439 ntBASIC4.66□□□□□ -1.66
RPL39P62891 AL157899.1-201ENST00000604110 936 ntBASIC4.66□□□□□ -1.66
RPL39P62891 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC4.66□□□□□ -1.66
RPL39P62891 AC012629.3-201ENST00000623397 328 ntBASIC4.66□□□□□ -1.66
RPL39P62891 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC4.66□□□□□ -1.66
RPL39P62891 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RPL39P62891 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC4.66□□□□□ -1.66
RPL39P62891 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
RPL39P62891 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RPL39P62891 AC062022.1-201ENST00000451026 1684 ntBASIC4.66□□□□□ -1.66
RPL39P62891 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
RPL39P62891 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RPL39P62891 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RPL39P62891 EEF1A1P12-201ENST00000443590 1346 ntBASIC4.66□□□□□ -1.66
RPL39P62891 AC102941.1-201ENST00000567616 1537 ntBASIC4.66□□□□□ -1.66
RPL39P62891 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
RPL39P62891 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RPL39P62891 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RPL39P62891 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RPL39P62891 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC4.65□□□□□ -1.66
RPL39P62891 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
RPL39P62891 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RPL39P62891 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RPL39P62891 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.66
RPL39P62891 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RPL39P62891 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
RPL39P62891 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC4.65□□□□□ -1.66
RPL39P62891 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC4.65□□□□□ -1.66
RPL39P62891 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RPL39P62891 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC4.65□□□□□ -1.66
RPL39P62891 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RPL39P62891 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RPL39P62891 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RPL39P62891 RNU4-81P-201ENST00000363561 144 ntBASIC4.65□□□□□ -1.67
RPL39P62891 RNU1-55P-201ENST00000365510 158 ntBASIC4.65□□□□□ -1.67
RPL39P62891 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
RPL39P62891 LCN1P2-201ENST00000372030 223 ntBASIC4.65□□□□□ -1.67
RPL39P62891 PPIAP26-201ENST00000377951 522 ntBASIC4.65□□□□□ -1.67
RPL39P62891 AL050335.1-201ENST00000396909 869 ntBASIC4.65□□□□□ -1.67
RPL39P62891 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC4.65□□□□□ -1.67
RPL39P62891 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC4.65□□□□□ -1.67
RPL39P62891 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC4.65□□□□□ -1.67
RPL39P62891 ZBTB8OSP2-201ENST00000423890 504 ntBASIC4.65□□□□□ -1.67
RPL39P62891 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC4.65□□□□□ -1.67
RPL39P62891 PAICSP2-201ENST00000429118 1150 ntBASIC4.65□□□□□ -1.67
RPL39P62891 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
RPL39P62891 DBIL5P2-201ENST00000443827 253 ntBASIC4.65□□□□□ -1.67
RPL39P62891 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RPL39P62891 HIST1H2APS6-201ENST00000448609 364 ntBASIC4.65□□□□□ -1.67
RPL39P62891 PYM1-204ENST00000454792 884 ntTSL 2 BASIC4.65□□□□□ -1.67
RPL39P62891 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC4.65□□□□□ -1.67
RPL39P62891 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC4.65□□□□□ -1.67
RPL39P62891 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC4.65□□□□□ -1.67
RPL39P62891 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RPL39P62891 RN7SL518P-201ENST00000491887 280 ntBASIC4.65□□□□□ -1.67
RPL39P62891 RN7SL608P-201ENST00000492377 279 ntBASIC4.65□□□□□ -1.67
RPL39P62891 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC4.65□□□□□ -1.67
RPL39P62891 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC4.65□□□□□ -1.67
RPL39P62891 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC4.65□□□□□ -1.67
RPL39P62891 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC4.65□□□□□ -1.67
RPL39P62891 AP003084.1-201ENST00000524828 742 ntBASIC4.65□□□□□ -1.67
RPL39P62891 OR5M4P-201ENST00000529436 925 ntBASIC4.65□□□□□ -1.67
RPL39P62891 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC4.65□□□□□ -1.67
RPL39P62891 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC4.65□□□□□ -1.67
RPL39P62891 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC4.65□□□□□ -1.67
RPL39P62891 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC4.65□□□□□ -1.67
RPL39P62891 AC026458.1-201ENST00000564330 438 ntBASIC4.65□□□□□ -1.67
RPL39P62891 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC4.65□□□□□ -1.67
RPL39P62891 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC4.65□□□□□ -1.67
RPL39P62891 AC061975.3-201ENST00000583209 244 ntBASIC4.65□□□□□ -1.67
RPL39P62891 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC4.65□□□□□ -1.67
RPL39P62891 AP001120.4-201ENST00000590231 108 ntBASIC4.65□□□□□ -1.67
RPL39P62891 AL136139.1-201ENST00000605568 222 ntBASIC4.65□□□□□ -1.67
RPL39P62891 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC4.65□□□□□ -1.67
RPL39P62891 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC4.65□□□□□ -1.67
RPL39P62891 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC4.65□□□□□ -1.67
RPL39P62891 AC004241.2-201ENST00000614562 444 ntBASIC4.65□□□□□ -1.67
RPL39P62891 SNORA16A-202ENST00000628458 135 ntBASIC4.65□□□□□ -1.67
RPL39P62891 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC4.65□□□□□ -1.67
RPL39P62891 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC4.65□□□□□ -1.67
RPL39P62891 AL121936.2-201ENST00000641935 662 ntBASIC4.65□□□□□ -1.67
RPL39P62891 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC4.65□□□□□ -1.67
RPL39P62891 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RPL39P62891 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
RPL39P62891 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RPL39P62891 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RPL39P62891 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC4.65□□□□□ -1.67
RPL39P62891 AC011815.2-201ENST00000618230 2021 ntBASIC4.65□□□□□ -1.67
RPL39P62891 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC4.65□□□□□ -1.67
RPL39P62891 LINC01616-201ENST00000561816 2280 ntBASIC4.65□□□□□ -1.67
RPL39P62891 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC4.65□□□□□ -1.67
RPL39P62891 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC4.65□□□□□ -1.67
RPL39P62891 AC010624.4-201ENST00000597606 1351 ntBASIC4.65□□□□□ -1.67
RPL39P62891 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
RPL39P62891 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms