Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AL161636.2-201ENST00000445179 927 ntBASIC11.63□□□□□ -0.55
SMARCA4P51532 SCARNA18.1-201ENST00000516330 83 ntBASIC11.63□□□□□ -0.55
SMARCA4P51532 AC007956.1-201ENST00000555623 542 ntBASIC11.63□□□□□ -0.55
SMARCA4P51532 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
SMARCA4P51532 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC11.63□□□□□ -0.55
SMARCA4P51532 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC11.63□□□□□ -0.55
SMARCA4P51532 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SMARCA4P51532 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMARCA4P51532 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC11.63□□□□□ -0.55
SMARCA4P51532 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMARCA4P51532 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC11.62□□□□□ -0.55
SMARCA4P51532 OR4C1P-202ENST00000641065 1569 ntBASIC11.62□□□□□ -0.55
SMARCA4P51532 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMARCA4P51532 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
SMARCA4P51532 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMARCA4P51532 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMARCA4P51532 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SMARCA4P51532 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC11.62□□□□□ -0.55
SMARCA4P51532 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMARCA4P51532 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMARCA4P51532 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SMARCA4P51532 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
SMARCA4P51532 RN7SKP278-201ENST00000410504 342 ntBASIC11.62□□□□□ -0.55
SMARCA4P51532 RN7SKP286-201ENST00000410894 299 ntBASIC11.62□□□□□ -0.55
SMARCA4P51532 AC244452.1-201ENST00000413798 141 ntBASIC11.62□□□□□ -0.55
SMARCA4P51532 AC130360.1-201ENST00000425489 1117 ntBASIC11.62□□□□□ -0.55
SMARCA4P51532 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC11.62□□□□□ -0.55
SMARCA4P51532 SUMO2P1-206ENST00000445436 284 ntBASIC11.62□□□□□ -0.55
SMARCA4P51532 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC11.62□□□□□ -0.55
SMARCA4P51532 RPL23AP68-201ENST00000480924 445 ntBASIC11.62□□□□□ -0.55
SMARCA4P51532 RNA5SP434-201ENST00000516647 121 ntBASIC11.62□□□□□ -0.55
SMARCA4P51532 AC130365.2-201ENST00000525882 1201 ntBASIC11.62□□□□□ -0.55
SMARCA4P51532 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC11.62□□□□□ -0.55
SMARCA4P51532 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC11.62□□□□□ -0.55
SMARCA4P51532 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC11.62□□□□□ -0.55
SMARCA4P51532 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMARCA4P51532 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMARCA4P51532 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SMARCA4P51532 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC11.62□□□□□ -0.55
SMARCA4P51532 AC015871.4-201ENST00000624650 2260 ntBASIC11.62□□□□□ -0.55
SMARCA4P51532 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC11.62□□□□□ -0.55
SMARCA4P51532 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMARCA4P51532 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMARCA4P51532 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMARCA4P51532 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SMARCA4P51532 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SMARCA4P51532 AL049697.3-201ENST00000406493 982 ntBASIC11.61□□□□□ -0.55
SMARCA4P51532 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC11.61□□□□□ -0.55
SMARCA4P51532 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC11.61□□□□□ -0.55
SMARCA4P51532 HMGN1P36-201ENST00000446623 298 ntBASIC11.61□□□□□ -0.55
SMARCA4P51532 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SMARCA4P51532 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SMARCA4P51532 RNA5SP271-201ENST00000516700 88 ntBASIC11.61□□□□□ -0.55
SMARCA4P51532 AC122713.1-201ENST00000518368 1015 ntBASIC11.61□□□□□ -0.55
SMARCA4P51532 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC11.61□□□□□ -0.55
SMARCA4P51532 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC11.61□□□□□ -0.55
SMARCA4P51532 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC11.61□□□□□ -0.55
SMARCA4P51532 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC11.61□□□□□ -0.55
SMARCA4P51532 CYP2G2P-201ENST00000594920 1485 ntBASIC11.61□□□□□ -0.55
SMARCA4P51532 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
SMARCA4P51532 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC11.61□□□□□ -0.55
SMARCA4P51532 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC11.61□□□□□ -0.55
SMARCA4P51532 AL590065.1-201ENST00000603371 4774 ntBASIC11.61□□□□□ -0.55
SMARCA4P51532 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
SMARCA4P51532 ATP8A2-204ENST00000381655 9575 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMARCA4P51532 RNA5SP178-201ENST00000410380 128 ntBASIC11.6□□□□□ -0.55
SMARCA4P51532 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
SMARCA4P51532 OR2A1-AS1-202ENST00000467944 422 ntBASIC11.6□□□□□ -0.55
SMARCA4P51532 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC11.6□□□□□ -0.55
SMARCA4P51532 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC11.6□□□□□ -0.55
SMARCA4P51532 SH3GLB1-203ENST00000535010 6227 ntTSL 2 BASIC11.6□□□□□ -0.55
SMARCA4P51532 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC11.6□□□□□ -0.55
SMARCA4P51532 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
SMARCA4P51532 PLEKHA3P1-201ENST00000598554 894 ntBASIC11.6□□□□□ -0.55
SMARCA4P51532 5S_rRNA.28-201ENST00000638107 119 ntBASIC11.6□□□□□ -0.55
SMARCA4P51532 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SMARCA4P51532 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SMARCA4P51532 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMARCA4P51532 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SMARCA4P51532 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
SMARCA4P51532 AL034417.4-202ENST00000642135 2236 ntBASIC11.6□□□□□ -0.55
SMARCA4P51532 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC11.6□□□□□ -0.55
SMARCA4P51532 PLA2G7-202ENST00000537365 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMARCA4P51532 PCSK1-201ENST00000311106 5086 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMARCA4P51532 SFTPD-AS1-201ENST00000608229 5001 ntBASIC11.6□□□□□ -0.55
SMARCA4P51532 WDR31-202ENST00000374193 4878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMARCA4P51532 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC11.6□□□□□ -0.55
SMARCA4P51532 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SMARCA4P51532 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMARCA4P51532 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC11.6□□□□□ -0.55
SMARCA4P51532 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMARCA4P51532 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC11.6□□□□□ -0.55
SMARCA4P51532 CDK7P1-201ENST00000434574 693 ntBASIC11.6□□□□□ -0.55
SMARCA4P51532 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC11.6□□□□□ -0.55
SMARCA4P51532 ATP5LP2-201ENST00000440646 311 ntBASIC11.6□□□□□ -0.55
SMARCA4P51532 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC11.6□□□□□ -0.55
SMARCA4P51532 CR383658.1-201ENST00000514609 734 ntBASIC11.6□□□□□ -0.55
SMARCA4P51532 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC11.6□□□□□ -0.55
SMARCA4P51532 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC11.6□□□□□ -0.55
SMARCA4P51532 CETN3-206ENST00000522864 738 ntTSL 3 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms